Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB9A
  • Mouse genes Rab9
  • Rat genes Rab9a
  • Zfish genes rab9a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019003	GDP binding	RAB9A	IDA		Human	PMID:15263003
Molecular Function	GO:0019003	GDP binding	RAB9A	IDA		Human	PMID:20937701
Molecular Function	GO:0005525	GTP binding	RAB9A	IDA		Human	PMID:15263003
Molecular Function	GO:0005525	GTP binding	RAB9A	IDA		Human	PMID:21808068
Molecular Function	GO:0003924	GTPase activity	RAB9A	IDA		Human	PMID:15263003
Molecular Function	GO:0042802	identical protein binding	Rab9	IPI	UniProtKB:Q9R0M6	Mouse	MGI:MGI:5784965|PMID:25220469
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:Q9UJC3	Human	PMID:15471887
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:Q8IWJ2	Human	PMID:18243103
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:Q8IWE5	Human	PMID:18787122
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:O94955	Human	PMID:19490898
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:Q9NQG7	Human	PMID:20048159
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:O43147	Human	PMID:21808068
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:Q2NKQ1	Human	PMID:22637480
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:Q9Y2I1	Human	PMID:23386062
Molecular Function	GO:0005515	protein binding	RAB9A	IPI	UniProtKB:Q9Y2I1	Human	PMID:29568061
Molecular Function	GO:0005515	protein binding	Rab9	IPI	UniProtKB:Q99KG7	Mouse	MGI:MGI:5795820|PMID:20048159
Molecular Function	GO:0005515	protein binding	Rab9	IPI	UniProtKB:Q99KG7	Mouse	MGI:MGI:5755324|PMID:26620560
Molecular Function	GO:0005515	protein binding	Rab9	IPI	UniProtKB:O43147	Mouse	MGI:MGI:5755324|PMID:26620560
Molecular Function	GO:0005515	protein binding	Rab9	IPI	UniProtKB:Q8BPQ7	Mouse	MGI:MGI:5784965|PMID:25220469
Molecular Function	GO:0005515	protein binding	Rab9	IPI	UniProtKB:Q8BPQ7-1	Mouse	MGI:MGI:5784965|PMID:25220469
Cellular Component	GO:0030659	cytoplasmic vesicle membrane	Rab9	IDA		Mouse	MGI:MGI:5784965|PMID:25220469
Cellular Component	GO:0070062	extracellular exosome	RAB9A	HDA		Human	PMID:20458337
Cellular Component	GO:0005770	late endosome	RAB9A	IDA		Human	PMID:15078902
Cellular Component	GO:0005764	lysosome	RAB9A	IDA		Human	PMID:15078902
Cellular Component	GO:0042470	melanosome	Rab9	IDA		Mouse	MGI:MGI:5755324|PMID:26620560
Cellular Component	GO:0045335	phagocytic vesicle	RAB9A	IDA		Human	PMID:21255211
Biological Process	GO:0052403	negative regulation by host of symbiont catalytic activity	RAB9A	IMP		Human	PMID:18787122
Biological Process	GO:0045921	positive regulation of exocytosis	RAB9A	IMP		Human	PMID:19966785
Biological Process	GO:0032880	regulation of protein localization	RAB9A	IMP		Human	PMID:18787122

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern