Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAB9B
  • Mouse genes Rab9b
  • Rat genes Rab9b
  • Zfish genes rab9b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rab9b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019003	GDP binding	RAB9B	IDA		Human	PMID:20937701
Molecular Function	GO:0042802	identical protein binding	Rab9b	IPI	UniProtKB:Q8BHH2	Mouse	MGI:MGI:5784965|PMID:25220469
Molecular Function	GO:0005515	protein binding	RAB9B	IPI	UniProtKB:O94955	Human	PMID:19490898
Molecular Function	GO:0005515	protein binding	RAB9B	IPI	UniProtKB:Q9NQG7	Human	PMID:20048159
Molecular Function	GO:0005515	protein binding	Rab9b	IPI	UniProtKB:Q8BPQ7	Mouse	MGI:MGI:5784965|PMID:25220469
Molecular Function	GO:0005515	protein binding	Rab9b	IPI	UniProtKB:Q8BPQ7-1	Mouse	MGI:MGI:5784965|PMID:25220469
Cellular Component	GO:0045335	phagocytic vesicle	RAB9B	IDA		Human	PMID:21255211

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern