Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAD54B
  • Mouse genes Rad54b
  • Rat genes Fsbp,Rad54b
  • Zfish genes rad54b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rad54b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015616	DNA translocase activity	RAD54B	IDA		Human	PMID:16428451
Molecular Function	GO:0005515	protein binding	RAD54B	IPI	UniProtKB:Q8TBB1	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RAD54B	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RAD54B	IPI	UniProtKB:P54253	Human	PMID:32814053
Cellular Component	GO:0005634	nucleus	Rad54b	IDA		Rat	PMID:20531236|RGD:9480234
Biological Process	GO:0008340	determination of adult lifespan	Rad54b	IGI	MGI:MGI:107202	Mouse	PMID:19061978
Biological Process	GO:0008340	determination of adult lifespan	Rad54b	IGI	MGI:MGI:894697	Mouse	PMID:19061978
Biological Process	GO:0006974	DNA damage response	Rad54b	IGI	MGI:MGI:107202	Mouse	PMID:19061978
Biological Process	GO:0006974	DNA damage response	Rad54b	IMP	MGI:MGI:3617695	Mouse	PMID:16428451
Biological Process	GO:0000724	double-strand break repair via homologous recombination	RAD54B	IDA		Human	PMID:16428451
Biological Process	GO:0000724	double-strand break repair via homologous recombination	Rad54b	IGI	MGI:MGI:894697	Mouse	PMID:16428451
Biological Process	GO:0000724	double-strand break repair via homologous recombination	Rad54b	IMP	MGI:MGI:3617695	Mouse	PMID:19061978
Biological Process	GO:0010212	response to ionizing radiation	Rad54b	IGI	MGI:MGI:894697	Mouse	PMID:19061978
Biological Process	GO:0010212	response to ionizing radiation	Rad54b	IMP	MGI:MGI:3617695	Mouse	PMID:16428451
Biological Process	GO:0010212	response to ionizing radiation	Rad54b	IGI	MGI:MGI:107202	Mouse	PMID:19061978
Biological Process	GO:0009410	response to xenobiotic stimulus	Rad54b	IMP	MGI:MGI:3617695	Mouse	PMID:16428451

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern