Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAD54L
  • Mouse genes Rad54l
  • Rat genes Rad54l
  • Zfish genes rad54l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rad54l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008094	ATP-dependent activity, acting on DNA	rad54l	IDA		Zfish	PMID:15806108
Molecular Function	GO:0036310	ATP-dependent DNA/DNA annealing activity	RAD54L	IDA		Human	PMID:22705370
Molecular Function	GO:0005515	protein binding	RAD54L	IPI	UniProtKB:Q06609	Human	PMID:16990250
Molecular Function	GO:0005515	protein binding	RAD54L	IPI	UniProtKB:Q9H2K2	Human	PMID:22153077
Molecular Function	GO:0005515	protein binding	RAD54L	IPI	UniProtKB:Q96HA8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RAD54L	IPI	UniProtKB:Q96HA8	Human	PMID:28514442
Cellular Component	GO:0005654	nucleoplasm	RAD54L	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	RAD54L	IMP		Human	PMID:16990250
Biological Process	GO:0051276	chromosome organization	Rad54l	IGI	MGI:MGI:1335098	Mouse	PMID:15175260
Biological Process	GO:0008340	determination of adult lifespan	Rad54l	IGI	MGI:MGI:3605986	Mouse	PMID:19061978
Biological Process	GO:0008340	determination of adult lifespan	Rad54l	IGI	MGI:MGI:107202	Mouse	PMID:19061978
Biological Process	GO:0006974	DNA damage response	Rad54l	IMP	MGI:MGI:2183934	Mouse	PMID:16428451
Biological Process	GO:0006974	DNA damage response	Rad54l	IGI	MGI:MGI:107202	Mouse	PMID:19061978
Biological Process	GO:0006302	double-strand break repair	Rad54l	IGI	MGI:MGI:1335098	Mouse	PMID:15175260
Biological Process	GO:0000724	double-strand break repair via homologous recombination	Rad54l	IGI	MGI:MGI:3605986	Mouse	PMID:16428451
Biological Process	GO:0000724	double-strand break repair via homologous recombination	Rad54l	IMP	MGI:MGI:2183934	Mouse	PMID:19061978
Biological Process	GO:0010212	response to ionizing radiation	Rad54l	IMP	MGI:MGI:2183934	Mouse	PMID:16428451
Biological Process	GO:0010212	response to ionizing radiation	Rad54l	IMP	MGI:MGI:2183934	Mouse	PMID:20150414
Biological Process	GO:0010212	response to ionizing radiation	Rad54l	IGI	MGI:MGI:3605986	Mouse	PMID:19061978
Biological Process	GO:0010212	response to ionizing radiation	Rad54l	IGI	MGI:MGI:107202	Mouse	PMID:19061978
Biological Process	GO:0009410	response to xenobiotic stimulus	Rad54l	IMP	MGI:MGI:2183934	Mouse	PMID:16428451

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern