Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAE1
  • Mouse genes Rae1
  • Rat genes Rae1
  • Zfish genes rae1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rae1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:P52948	Human	PMID:17172455
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:Q14980	Human	PMID:17172455
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:P52948	Human	PMID:18832153
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:Q14683	Human	PMID:18832153
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:P52948	Human	PMID:20498086
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:E5LBS6	Human	PMID:25544563
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:P42858	Human	PMID:25959826
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:P51784	Human	PMID:29293652
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:P52948	Human	PMID:33097660
Molecular Function	GO:0005515	protein binding	RAE1	IPI	UniProtKB:P52948	Human	PMID:35096974
Molecular Function	GO:0005515	protein binding	Rae1	IPI	UniProtKB:O75592	Rat	PMID:22357847|RGD:8553785
Molecular Function	GO:0005515	protein binding	Rae1	IPI	UniProtKB:Q17551	Rat	PMID:22357847|RGD:8553785
Molecular Function	GO:0003723	RNA binding	RAE1	IDA		Human	PMID:9256445
Cellular Component	GO:0001650	fibrillar center	RAE1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0097431	mitotic spindle pole	RAE1	IMP		Human	PMID:17172455
Cellular Component	GO:0005635	nuclear envelope	RAE1	IDA		Human	PMID:24315095
Cellular Component	GO:0005635	nuclear envelope	RAE1	IDA		Human	PMID:9256445
Cellular Component	GO:0005635	nuclear envelope	Rae1	IDA		Rat	PMID:9256445|RGD:10448948
Cellular Component	GO:0005643	nuclear pore	RAE1	IDA		Human	PMID:9256445
Cellular Component	GO:0005654	nucleoplasm	RAE1	IDA		Human	GO_REF:0000052
Biological Process	GO:0071407	cellular response to organic cyclic compound	Rae1	IDA		Mouse	PMID:11567106
Biological Process	GO:0060236	regulation of mitotic spindle organization	RAE1	IMP		Human	PMID:17172455

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern