Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAET1G,RAET1L
  • Mouse genes Raet1c
  • Rat genes Raet1e,Raet1l
  • Zfish genes mhc1laa,mhc1lba,mhc1lca,mhc1lga,mhc1lla,si:dkey-52p2.5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Raet1c

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0046703	natural killer cell lectin-like receptor binding	RAET1G	IPI	UniProtKB:P26718	Human	PMID:15240696
Molecular Function	GO:0046703	natural killer cell lectin-like receptor binding	Raet1c	IDA		Mouse	MGI:MGI:1860373|PMID:10894171
Molecular Function	GO:0005515	protein binding	RAET1L	IPI	UniProtKB:P26718	Human	PMID:19658097
Molecular Function	GO:0005515	protein binding	RAET1L	IPI	UniProtKB:P26718	Human	PMID:28559451
Molecular Function	GO:0005515	protein binding	RAET1L	IPI	UniProtKB:Q96EC8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RAET1L	IPI	UniProtKB:Q9GZY8-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RAET1G	IPI	UniProtKB:P26718	Human	PMID:15240696
Molecular Function	GO:0005515	protein binding	RAET1G	IPI	UniProtKB:O54709	Human	PMID:18544572
Molecular Function	GO:0005515	protein binding	RAET1G	IPI	UniProtKB:P26718	Human	PMID:19424970
Molecular Function	GO:0005515	protein binding	RAET1G	IPI	UniProtKB:P26718	Human	PMID:19658097
Molecular Function	GO:0005515	protein binding	Raet1c	IPI	UniProtKB:Q83156	Mouse	PMID:20166740
Cellular Component	GO:0009897	external side of plasma membrane	Raet1c	IDA		Mouse	PMID:20166740
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	RAET1L	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	RAET1G	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	RAET1L	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	RAET1G	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	Raet1c	IDA		Mouse	MGI:MGI:1860373|PMID:10894171
Biological Process	GO:0071360	cellular response to exogenous dsRNA	Raet1c	IDA		Mouse	PMID:14764662
Biological Process	GO:0071222	cellular response to lipopolysaccharide	Raet1c	IDA		Mouse	PMID:14764662
Biological Process	GO:0042742	defense response to bacterium	Raet1c	IDA		Mouse	PMID:14764662
Biological Process	GO:0042267	natural killer cell mediated cytotoxicity	RAET1G	IDA		Human	PMID:15240696
Biological Process	GO:0002729	positive regulation of natural killer cell cytokine production	RAET1G	IDA		Human	PMID:18544572
Biological Process	GO:0045954	positive regulation of natural killer cell mediated cytotoxicity	Raet1l	IDA		Rat	PMID:20306467|RGD:9685184

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern