Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RAI1
  • Mouse genes Rai1
  • Rat genes Rai1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rai1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RAI1	IPI	UniProtKB:Q13526	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RAI1	IPI	UniProtKB:Q13526	Human	PMID:25416956
Cellular Component	GO:0005654	nucleoplasm	RAI1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Rai1	IDA		Mouse	PMID:15746153
Biological Process	GO:0032922	circadian regulation of gene expression	RAI1	IMP		Human	PMID:22578325
Biological Process	GO:0032922	circadian regulation of gene expression	Rai1	IMP		Mouse	MGI:MGI:5489969|PMID:22578325
Biological Process	GO:0040015	negative regulation of multicellular organism growth	Rai1	IMP	MGI:MGI:3526160	Mouse	PMID:15746153
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	RAI1	IDA		Human	PMID:22578325
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Rai1	IDA		Mouse	PMID:15746153
Biological Process	GO:0001501	skeletal system development	Rai1	IMP	MGI:MGI:3521985	Mouse	PMID:17273973
Biological Process	GO:0001501	skeletal system development	Rai1	IMP	MGI:MGI:3521986	Mouse	PMID:17273973
Biological Process	GO:0001501	skeletal system development	Rai1	IMP	MGI:MGI:3526160	Mouse	PMID:17273973
Biological Process	GO:0001501	skeletal system development	Rai1	IMP	MGI:MGI:3526160	Mouse	PMID:15746153

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern