Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBBP4
  • Mouse genes Rbbp4
  • Rat genes Rbbp4
  • Zfish genes rbbp4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbbp4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008094	ATP-dependent activity, acting on DNA	RBBP4	IDA		Human	PMID:14609955
Molecular Function	GO:0042393	histone binding	RBBP4	IDA		Human	PMID:9651585
Molecular Function	GO:0042826	histone deacetylase binding	RBBP4	IPI	UniProtKB:Q92769	Human	PMID:17827154
Molecular Function	GO:0031492	nucleosomal DNA binding	RBBP4	HDA		Human	PMID:16217013
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13547	Human	PMID:10220385
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P28370	Human	PMID:14609955
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q12830	Human	PMID:14609955
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13547	Human	PMID:19703393
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13547	Human	PMID:20127688
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q8IX07	Human	PMID:21047798
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13547	Human	PMID:21258344
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q8IWS0	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13547	Human	PMID:23752268
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13330	Human	PMID:24920672
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:O14929	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13330	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13547	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:O14929	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13330	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q9BRL8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q03468	Human	PMID:26030138
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13330	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13547	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q5T9G4	Human	PMID:30026490
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q17R98	Human	PMID:30045876
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q03112	Human	PMID:30462309
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q9HAZ2	Human	PMID:30462309
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P51692	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13330	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:O00291	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:O94985-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:O95817	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P00441	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P02768-3	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P07237	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P13473-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P21333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P30038	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P31948	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P36544	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P55212	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P60201-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P62826	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:P06400	Human	PMID:7503932
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:Q13547	Human	PMID:9150135
Molecular Function	GO:0005515	protein binding	RBBP4	IPI	UniProtKB:O75446	Human	PMID:9651585
Molecular Function	GO:0005515	protein binding	Rbbp4	IPI	UniProtKB:P70288,UniProtKB:Q6ZQ88,UniProtKB:Q9Z0S2	Mouse	MGI:MGI:5817507|PMID:28053041
Molecular Function	GO:0005515	protein binding	Rbbp4	IPI	UniProtKB:E9Q9M8	Mouse	MGI:MGI:6867105|PMID:34180153
Molecular Function	GO:0005515	protein binding	Rbbp4	IPI	PR:P59178	Mouse	PMID:22770845
Molecular Function	GO:0005515	protein binding	Rbbp4	IPI	PR:Q9R190	Mouse	PMID:14645126
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Rbbp4	IDA		Mouse	MGI:MGI:5817507|PMID:28053041
Cellular Component	GO:1904949	ATPase complex	RBBP4	IDA		Human	PMID:14609955
Cellular Component	GO:0033186	CAF-1 complex	RBBP4	IPI		Human	PMID:9614144
Cellular Component	GO:0033186	CAF-1 complex	RBBP4	IDA		Human	PMID:8858152
Cellular Component	GO:0000785	chromatin	RBBP4	IDA		Human	PMID:14718166
Cellular Component	GO:0000785	chromatin	RBBP4	HDA		Human	PMID:16217013
Cellular Component	GO:0000785	chromatin	RBBP4	IDA		Human	PMID:9614144
Cellular Component	GO:0000781	chromosome, telomeric region	RBBP4	IDA		Human	PMID:30045876
Cellular Component	GO:0005829	cytosol	RBBP4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0035098	ESC/E(Z) complex	RBBP4	IDA		Human	PMID:20075857
Cellular Component	GO:0035098	ESC/E(Z) complex	RBBP4	IDA		Human	PMID:23104054
Cellular Component	GO:0035098	ESC/E(Z) complex	RBBP4	IDA		Human	PMID:23273982
Cellular Component	GO:0035098	ESC/E(Z) complex	Rbbp4	IDA		Mouse	MGI:MGI:4436818|PMID:20064376
Cellular Component	GO:0035098	ESC/E(Z) complex	Rbbp4	IDA		Mouse	PMID:31451685
Cellular Component	GO:0000118	histone deacetylase complex	RBBP4	IDA		Human	PMID:9651585
Cellular Component	GO:0005654	nucleoplasm	RBBP4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RBBP4	IDA		Human	PMID:22720776
Cellular Component	GO:0005634	nucleus	RBBP4	IDA		Human	PMID:14609955
Cellular Component	GO:0005634	nucleus	RBBP4	IDA		Human	PMID:20523938
Cellular Component	GO:0005634	nucleus	RBBP4	IDA		Human	PMID:28977666
Cellular Component	GO:0005634	nucleus	RBBP4	IDA		Human	PMID:30026490
Cellular Component	GO:0005634	nucleus	RBBP4	IDA		Human	PMID:33283408
Cellular Component	GO:0005634	nucleus	Rbbp4	IDA		Mouse	MGI:MGI:5817507|PMID:28053041
Cellular Component	GO:0005634	nucleus	Rbbp4	IDA		Mouse	PMID:20720167
Cellular Component	GO:0005634	nucleus	Rbbp4	IDA		Mouse	PMID:22770845
Cellular Component	GO:0005634	nucleus	Rbbp4	IDA		Rat	PMID:18067919|RGD:2326010
Cellular Component	GO:0016581	NuRD complex	RBBP4	IDA		Human	PMID:19644445
Cellular Component	GO:0016581	NuRD complex	RBBP4	IDA		Human	PMID:22926524
Cellular Component	GO:0016581	NuRD complex	RBBP4	IDA		Human	PMID:33283408
Cellular Component	GO:0016581	NuRD complex	Rbbp4	IDA		Mouse	PMID:14645126
Cellular Component	GO:0016589	NURF complex	RBBP4	IPI		Human	PMID:14609955
Cellular Component	GO:0016589	NURF complex	RBBP4	IDA		Human	PMID:20850016
Cellular Component	GO:0032991	protein-containing complex	RBBP4	IDA		Human	PMID:14718166
Cellular Component	GO:0032991	protein-containing complex	RBBP4	HDA		Human	PMID:16217013
Biological Process	GO:0006338	chromatin remodeling	RBBP4	IDA		Human	PMID:14609955
Biological Process	GO:0006338	chromatin remodeling	RBBP4	HDA		Human	PMID:16217013
Biological Process	GO:0006338	chromatin remodeling	RBBP4	IDA		Human	PMID:9790534
Biological Process	GO:0006335	DNA replication-dependent chromatin assembly	RBBP4	IDA		Human	PMID:8858152
Biological Process	GO:0006335	DNA replication-dependent chromatin assembly	RBBP4	IDA		Human	PMID:9614144
Biological Process	GO:0031101	fin regeneration	rbbp4	IGI	ZFIN:ZDB-MRPHLNO-140930-5,ZFIN:ZDB-MRPHLNO-140930-6	Zfish	PMID:24779377
Biological Process	GO:0016575	histone deacetylation	RBBP4	IDA		Human	PMID:10444591
Biological Process	GO:0006334	nucleosome assembly	RBBP4	IDA		Human	PMID:14718166
Biological Process	GO:0006355	regulation of DNA-templated transcription	RBBP4	IDA		Human	PMID:14609955
Biological Process	GO:0060416	response to growth hormone	Rbbp4	IEP		Rat	PMID:16127721|RGD:1626369

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern