Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBFOX2
  • Mouse genes Rbfox2
  • Rat genes Rbfox2
  • Zfish genes rbfox2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbfox2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140297	DNA-binding transcription factor binding	RBFOX2	IDA		Human	PMID:11875103
Molecular Function	GO:0003729	mRNA binding	Rbfox2	IDA		Mouse	PMID:22357600
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:P03372	Human	PMID:11875103
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q15038	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q9BQY4	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q96PU8	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q9NWB1	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q9BQY4	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:P52597	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q96PU8	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:P54253	Human	PMID:23275563
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:O75553	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:O76064	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:P25788	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:P52597	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:P54253	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q08AM6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q13554	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q15038	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q6P1W5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q8N9W6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q8NDC0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q96HR8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q9Y5V3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q08AM6	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RBFOX2	IPI	UniProtKB:Q8N9W6	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Rbfox2	IPI	PR:P39688	Mouse	PMID:9185665
Molecular Function	GO:0003723	RNA binding	RBFOX2	IDA		Human	PMID:11875103
Molecular Function	GO:0003723	RNA binding	RBFOX2	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RBFOX2	HDA		Human	PMID:22681889
Molecular Function	GO:0003714	transcription corepressor activity	RBFOX2	IDA		Human	PMID:11875103
Cellular Component	GO:0005654	nucleoplasm	RBFOX2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RBFOX2	IDA		Human	PMID:11875103
Cellular Component	GO:0005634	nucleus	Rbfox2	IDA		Mouse	MGI:MGI:3805428|PMID:18381283
Cellular Component	GO:0005634	nucleus	Rbfox2	IDA		Mouse	MGI:MGI:3770484|PMID:17715393
Cellular Component	GO:0005634	nucleus	Rbfox2	IDA		Mouse	PMID:21177649
Cellular Component	GO:0005634	nucleus	Rbfox2	IDA		Mouse	PMID:22357600
Cellular Component	GO:0005634	nucleus	Rbfox2	IDA		Mouse	PMID:19075228
Cellular Component	GO:0005634	nucleus	Rbfox2	IDA		Mouse	PMID:11401487
Biological Process	GO:0055013	cardiac muscle cell development	rbfox2	IGI	ZFIN:ZDB-MRPHLNO-111205-1,ZFIN:ZDB-MRPHLNO-111205-3	Zfish	PMID:21925157
Biological Process	GO:0048813	dendrite morphogenesis	Rbfox2	IMP	MGI:MGI:4838182	Mouse	PMID:22357600
Biological Process	GO:0030520	intracellular estrogen receptor signaling pathway	RBFOX2	IDA		Human	PMID:11875103
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	RBFOX2	IDA		Human	PMID:11875103
Biological Process	GO:0050885	neuromuscular process controlling balance	Rbfox2	IGI	MGI:MGI:1926224	Mouse	PMID:22357600
Biological Process	GO:0021942	radial glia guided migration of Purkinje cell	Rbfox2	IMP	MGI:MGI:4838182	Mouse	PMID:22357600
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Rbfox2	IMP		Mouse	MGI:MGI:3770484|PMID:17715393
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Rbfox2	IMP		Mouse	MGI:MGI:5284784|PMID:17101796
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Rbfox2	IMP	MGI:MGI:4838182	Mouse	PMID:22357600
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Rbfox2	IGI	MGI:MGI:1926224	Mouse	PMID:22357600
Biological Process	GO:0010724	regulation of definitive erythrocyte differentiation	Rbfox2	IDA		Mouse	MGI:MGI:3770484|PMID:17715393
Biological Process	GO:0043484	regulation of RNA splicing	rbfox2	IGI	ZFIN:ZDB-MRPHLNO-111205-1,ZFIN:ZDB-MRPHLNO-111205-3	Zfish	PMID:21925157
Biological Process	GO:0043484	regulation of RNA splicing	rbfox2	IMP	ZFIN:ZDB-MRPHLNO-111205-3	Zfish	PMID:21925157
Biological Process	GO:0048741	skeletal muscle fiber development	rbfox2	IGI	ZFIN:ZDB-MRPHLNO-111205-1,ZFIN:ZDB-MRPHLNO-111205-3	Zfish	PMID:21925157

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern