Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBM15
  • Mouse genes Rbm15
  • Rat genes Rbm15
  • Zfish genes rbm15
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbm15

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	RBM15	IDA		Human	PMID:26575292
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:Q04360	Human	PMID:16129689
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:Q9Y618	Human	PMID:16129689
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:Q13137	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:Q8IVL1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:Q92841	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:Q9BRK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:Q9C0F1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:O75533	Human	PMID:26575292
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:O95628	Human	PMID:26575292
Molecular Function	GO:0005515	protein binding	RBM15	IPI	UniProtKB:Q99873	Human	PMID:26575292
Molecular Function	GO:0005515	protein binding	Rbm15	IPI	PR:P31266	Mouse	PMID:17283045
Molecular Function	GO:0003723	RNA binding	RBM15	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RBM15	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	RBM15	IDA		Human	PMID:27602518
Molecular Function	GO:0003723	RNA binding	Rbm15	IDA		Mouse	MGI:MGI:6158801|PMID:25468569
Cellular Component	GO:0016607	nuclear speck	RBM15	IDA		Human	PMID:24100041
Cellular Component	GO:0005654	nucleoplasm	RBM15	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RBM15	IDA		Human	PMID:24100041
Cellular Component	GO:0005634	nucleus	Rbm15	IDA		Mouse	PMID:17283045
Cellular Component	GO:0036396	RNA N6-methyladenosine methyltransferase complex	RBM15	IDA		Human	PMID:27602518
Biological Process	GO:0001569	branching involved in blood vessel morphogenesis	Rbm15	IMP	MGI:MGI:3706995	Mouse	PMID:18981216
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	RBM15	IDA		Human	PMID:27602518
Biological Process	GO:0001889	liver development	rbm15	IMP	ZFIN:ZDB-GENO-211230-1	Zfish	PMID:32518161
Biological Process	GO:0045638	negative regulation of myeloid cell differentiation	Rbm15	IMP		Mouse	PMID:17283045
Biological Process	GO:0045638	negative regulation of myeloid cell differentiation	Rbm15	IDA		Mouse	PMID:17283045
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Rbm15	IDA		Mouse	PMID:17283045
Biological Process	GO:0060674	placenta blood vessel development	Rbm15	IMP	MGI:MGI:3706995	Mouse	PMID:18981216
Biological Process	GO:0007221	positive regulation of transcription of Notch receptor target	Rbm15	IDA		Mouse	PMID:17283045
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	RBM15	IDA		Human	PMID:26575292
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Rbm15	IDA		Mouse	MGI:MGI:6158801|PMID:25468569
Biological Process	GO:0045652	regulation of megakaryocyte differentiation	RBM15	IDA		Human	PMID:26575292
Biological Process	GO:0001510	RNA methylation	RBM15	IDA		Human	PMID:27602518
Biological Process	GO:0048536	spleen development	Rbm15	IMP	MGI:MGI:2656539,MGI:MGI:3706994	Mouse	PMID:18981216
Biological Process	GO:0038163	thrombopoietin-mediated signaling pathway	Rbm15	IDA		Mouse	MGI:MGI:6158801|PMID:25468569
Biological Process	GO:0060412	ventricular septum morphogenesis	Rbm15	IMP	MGI:MGI:2656539,MGI:MGI:3706994	Mouse	PMID:18981216

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern