Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBM15B
  • Mouse genes Rbm15b
  • Rat genes Rbm15b
  • Zfish genes rbm15b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbm15b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RBM15B	IPI	UniProtKB:Q04360	Human	PMID:16129689
Molecular Function	GO:0005515	protein binding	RBM15B	IPI	UniProtKB:Q9Y618	Human	PMID:16129689
Molecular Function	GO:0005515	protein binding	RBM15B	IPI	UniProtKB:Q8IVL1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	Rbm15b	IPI	UniProtKB:Q99JX7	Mouse	MGI:MGI:6158828|PMID:19586903
Molecular Function	GO:0003723	RNA binding	RBM15B	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RBM15B	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	RBM15B	IDA		Human	PMID:27602518
Cellular Component	GO:0005635	nuclear envelope	RBM15B	IDA		Human	PMID:19586903
Cellular Component	GO:0005635	nuclear envelope	Rbm15b	IDA		Mouse	MGI:MGI:6158828|PMID:19586903
Cellular Component	GO:0016607	nuclear speck	RBM15B	IDA		Human	PMID:19586903
Cellular Component	GO:0016607	nuclear speck	Rbm15b	IDA		Mouse	MGI:MGI:6158828|PMID:19586903
Cellular Component	GO:0005654	nucleoplasm	RBM15B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RBM15B	IDA		Human	PMID:16129689
Cellular Component	GO:0036396	RNA N6-methyladenosine methyltransferase complex	RBM15B	IDA		Human	PMID:27602518
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	RBM15B	IDA		Human	PMID:27602518
Biological Process	GO:0006406	mRNA export from nucleus	Rbm15b	IDA		Mouse	MGI:MGI:6158828|PMID:19586903
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	RBM15B	IDA		Human	PMID:16129689
Biological Process	GO:0001510	RNA methylation	RBM15B	IDA		Human	PMID:27602518

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern