Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBM19
  • Mouse genes Rbm19
  • Rat genes Rbm19
  • Zfish genes rbm19
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbm19

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003723	RNA binding	RBM19	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RBM19	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	Rbm19	IDA		Mouse	MGI:MGI:3608543|PMID:16027046
Cellular Component	GO:0016020	membrane	RBM19	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	RBM19	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	RBM19	IDA		Human	PMID:16027046
Cellular Component	GO:0005730	nucleolus	Rbm19	IDA		Mouse	PMID:16027046
Cellular Component	GO:0005654	nucleoplasm	Rbm19	IDA		Mouse	MGI:MGI:3608543|PMID:16027046
Biological Process	GO:0048546	digestive tract morphogenesis	rbm19	IMP	ZFIN:ZDB-GENO-040312-2	Zfish	PMID:12874115
Biological Process	GO:0040019	positive regulation of embryonic development	Rbm19	IMP		Mouse	MGI:MGI:3608543|PMID:16027046

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern