Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBM3
  • Mouse genes Rbm3
  • Rat genes Rbm3
  • Zfish genes cirbpb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbm3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P68318	Human	PMID:15518812
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P09012	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P0DJD3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P38159	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P61978	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q15415	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q5VWX1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P09012	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P0DJD3	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P38159	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q5VWX1	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q9Y6M1	Human	PMID:31484925
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P09012	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q5VWX1	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:O75525	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P09012	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P0DJD3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P38159	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P61978-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P79522	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:P84103	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q15365	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q15415	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q5VWX1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q6ZRY4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q86VE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBM3	IPI	UniProtKB:Q9Y3Y2-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rbm3	IPI	UniProtKB:P50878	Rat	PMID:15684048|RGD:8554266
Molecular Function	GO:0043023	ribosomal large subunit binding	Rbm3	IPI	PR:Q9D8E6	Mouse	PMID:15684048
Molecular Function	GO:0003723	RNA binding	RBM3	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RBM3	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	Rbm3	IDA		Rat	PMID:17403028|RGD:8554383
Cellular Component	GO:0030425	dendrite	Rbm3	IDA		Rat	PMID:17403028|RGD:8554383
Cellular Component	GO:0005654	nucleoplasm	RBM3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Rbm3	IDA		Rat	PMID:17403028|RGD:8554383
Biological Process	GO:0035196	miRNA processing	Rbm3	IDA		Mouse	PMID:15684048
Biological Process	GO:0045727	positive regulation of translation	Rbm3	IDA		Rat	PMID:17403028|RGD:8554383
Biological Process	GO:0006417	regulation of translation	Rbm3	IDA		Mouse	MGI:MGI:3530692|PMID:15684048
Biological Process	GO:0009409	response to cold	Rbm3	IDA		Mouse	PMID:15684048
Biological Process	GO:0009409	response to cold	cirbpb	IDA		Zfish	PMID:18805806
Biological Process	GO:0006412	translation	Rbm3	IDA		Mouse	PMID:15684048

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern