Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBMX
  • Mouse genes Rbmx
  • Rat genes Rbmx
  • Zfish genes rbmx
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbmx

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	RBMX	IDA		Human	PMID:18541147
Molecular Function	GO:0042802	identical protein binding	RBMX	IDA		Human	PMID:10749975
Molecular Function	GO:0042802	identical protein binding	RBMX	IPI	UniProtKB:P38159	Human	PMID:25416956
Molecular Function	GO:0042802	identical protein binding	RBMX	IPI	UniProtKB:P38159	Human	PMID:27107012
Molecular Function	GO:0042802	identical protein binding	RBMX	IPI	UniProtKB:P38159	Human	PMID:32296183
Molecular Function	GO:0003729	mRNA binding	RBMX	IDA		Human	PMID:12165565
Molecular Function	GO:0003729	mRNA binding	RBMX	IDA		Human	PMID:12761049
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:O75525	Human	PMID:10332027
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q07666	Human	PMID:10332027
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:O75525	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P61978	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P62995	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q07666	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q13242	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P62995	Human	PMID:12165565
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q9JKL7	Human	PMID:14559993
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:O75525	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P61978	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q14011	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q5VWX1	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q8TBB1	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q9NZ08	Human	PMID:18445477
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P61978	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P35637	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P61978	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P62995	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P09012	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P0DJD3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P49761	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P61978	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P79522	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P98179	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q14011	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q15415	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q5VWX1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q96A72	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q96AH0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q96HH0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q9NRW3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P62937	Human	PMID:25678563
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q8WWY3	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q5VWX1	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P35637	Human	PMID:27460707
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P98179	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:A6NEQ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:O75525	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P0DJD3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P61978-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P62995	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P79522	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P84103	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:P98179	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q13242	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q15415	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q5VWX1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q86VE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q8NE01	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q8WWY3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q96AH0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q9GZU5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q9NRW3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q9NX76	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q9Y5E9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Rbmx	IPI	RGD:1359711	Rat	PMID:19282290|RGD:2316827
Molecular Function	GO:0005515	protein binding	Rbmx	IPI	RGD:619886	Rat	PMID:19282290|RGD:2316827
Molecular Function	GO:0005515	protein binding	Rbmx	IPI	RGD:620613	Rat	PMID:19282290|RGD:2316827
Molecular Function	GO:0005515	protein binding	Rbmx	IPI	RGD:620921	Rat	PMID:19282290|RGD:2316827
Molecular Function	GO:0005515	protein binding	Rbmx	IPI	RGD:621459	Rat	PMID:19282290|RGD:2316827
Molecular Function	GO:0005515	protein binding	Rbmx	IPI	RGD:621706	Rat	PMID:19282290|RGD:2316827
Molecular Function	GO:0005515	protein binding	Rbmx	IPI	RGD:621738	Rat	PMID:19282290|RGD:2316827
Molecular Function	GO:0019904	protein domain specific binding	RBMX	IPI	UniProtKB:P0DJD4	Human	PMID:10749975
Molecular Function	GO:0003723	RNA binding	RBMX	IDA		Human	PMID:21327109
Molecular Function	GO:0003723	RNA binding	RBMX	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RBMX	HDA		Human	PMID:22681889
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	RBMX	IDA		Human	PMID:18541147
Molecular Function	GO:0003727	single-stranded RNA binding	Rbmx	IDA		Rat	PMID:19282290|RGD:2316827
Cellular Component	GO:0071013	catalytic step 2 spliceosome	RBMX	IDA		Human	PMID:11991638
Cellular Component	GO:0000791	euchromatin	RBMX	IDA		Human	PMID:21327109
Cellular Component	GO:0070062	extracellular exosome	RBMX	IDA		Human	PMID:18445477
Cellular Component	GO:0005615	extracellular space	RBMX	HDA		Human	PMID:23580065
Cellular Component	GO:0098978	glutamatergic synapse	Rbmx	EXP		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0098978	glutamatergic synapse	Rbmx	IDA		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0098978	glutamatergic synapse	Rbmx	IMP		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0016020	membrane	RBMX	HDA		Human	PMID:16210410
Cellular Component	GO:0005634	nucleus	RBMX	IDA		Human	PMID:10749975
Cellular Component	GO:0005634	nucleus	RBMX	IDA		Human	PMID:19282290
Cellular Component	GO:0005634	nucleus	Rbmx	IDA		Rat	PMID:19282290|RGD:2316827
Cellular Component	GO:0014069	postsynaptic density	Rbmx	EXP		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0014069	postsynaptic density	Rbmx	IDA		Rat	PMID:22238095|RGD:155230714
Cellular Component	GO:0032991	protein-containing complex	RBMX	IDA		Human	PMID:10749975
Cellular Component	GO:0044530	supraspliceosomal complex	RBMX	IDA		Human	PMID:19282290
Biological Process	GO:0071347	cellular response to interleukin-1	RBMX	IDA		Human	PMID:18445477
Biological Process	GO:0006509	membrane protein ectodomain proteolysis	RBMX	IDA		Human	PMID:18445477
Biological Process	GO:0006376	mRNA splice site selection	Rbmx	IMP		Rat	PMID:19282290|RGD:2316827
Biological Process	GO:0001649	osteoblast differentiation	RBMX	HDA		Human	PMID:16210410
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Rbmx	IMP		Rat	PMID:17188681|RGD:2316835
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	RBMX	IDA		Human	PMID:18541147
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	RBMX	IDA		Human	PMID:12165565
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	RBMX	IDA		Human	PMID:12761049
Biological Process	GO:0099175	regulation of postsynapse organization	Rbmx	IDA		Rat	PMID:22238095|RGD:155230714
Biological Process	GO:0099175	regulation of postsynapse organization	Rbmx	IMP		Rat	PMID:22238095|RGD:155230714
Biological Process	GO:0006366	transcription by RNA polymerase II	RBMX	IDA		Human	PMID:21327109

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern