Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBMX2
  • Mouse genes Rbmx2
  • Rat genes Rbmx2
  • Zfish genes rbmx2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbmx2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RBMX2	IPI	UniProtKB:Q8N5F7	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBMX2	IPI	UniProtKB:Q9BRD0	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	RBMX2	IPI	UniProtKB:A7MD48	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX2	IPI	UniProtKB:Q8N9E0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RBMX2	IPI	UniProtKB:Q9BU76	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	RBMX2	HDA		Human	PMID:22658674
Cellular Component	GO:0005783	endoplasmic reticulum	RBMX2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031965	nuclear membrane	RBMX2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	RBMX2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RBMX2	IDA		Human	PMID:29360106
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	RBMX2	IDA		Human	PMID:29360106
Biological Process	GO:0000398	mRNA splicing, via spliceosome	RBMX2	IDA		Human	PMID:29360106
Biological Process	GO:0000398	mRNA splicing, via spliceosome	rbmx2	IMP	ZFIN:ZDB-GENO-190718-2	Zfish	PMID:29969449

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern