Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RCSD1
  • Mouse genes Rcsd1
  • Rat genes Rcsd1
  • Zfish genes dub,zgc:153184
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rcsd1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051015	actin filament binding	RCSD1	IPI	UniProtKB:P47754	Human	PMID:15850461
Molecular Function	GO:0051015	actin filament binding	RCSD1	IPI	UniProtKB:P47757	Human	PMID:15850461
Biological Process	GO:0071474	cellular hyperosmotic response	RCSD1	IDA		Human	PMID:15850461
Biological Process	GO:0060271	cilium assembly	dub	IMP	ZFIN:ZDB-MRPHLNO-061207-1	Zfish	PMID:17013396
Biological Process	GO:0007368	determination of left/right symmetry	dub	IMP	ZFIN:ZDB-MRPHLNO-061207-1	Zfish	PMID:17013396
Biological Process	GO:0007368	determination of left/right symmetry	dub	IGI	ZFIN:ZDB-MRPHLNO-051207-2,ZFIN:ZDB-MRPHLNO-051207-3,ZFIN:ZDB-MRPHLNO-061207-1	Zfish	PMID:17013396
Biological Process	GO:0003146	heart jogging	dub	IMP	ZFIN:ZDB-MRPHLNO-061207-1	Zfish	PMID:17013396
Biological Process	GO:0001947	heart looping	dub	IMP	ZFIN:ZDB-MRPHLNO-061207-1	Zfish	PMID:17013396
Biological Process	GO:0061341	non-canonical Wnt signaling pathway involved in heart development	dub	IMP		Zfish	PMID:17013396
Biological Process	GO:0003009	skeletal muscle contraction	Rcsd1	IEP		Rat	PMID:15850461|RGD:8693359

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern