Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RCVRN
  • Mouse genes Rcvrn
  • Rat genes Rcvrn
  • Zfish genes rcvrn2,rcvrn3,rcvrna,rcvrnb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rcvrn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	Rcvrn	IMP	MGI:MGI:3584102	Mouse	PMID:15173221
Molecular Function	GO:0005509	calcium ion binding	Rcvrn	IMP		Rat	PMID:11581204|RGD:6902924
Cellular Component	GO:0030425	dendrite	Rcvrn	IDA		Rat	PMID:12598626|RGD:1303366
Biological Process	GO:0036368	cone photoresponse recovery	rcvrn2	IMP	ZFIN:ZDB-MRPHLNO-151209-2	Zfish	PMID:26246494
Biological Process	GO:0036368	cone photoresponse recovery	rcvrn2	IGI	ZFIN:ZDB-GENE-050913-106	Zfish	PMID:26246494
Biological Process	GO:0036368	cone photoresponse recovery	rcvrn3	IMP	ZFIN:ZDB-MRPHLNO-160112-1	Zfish	PMID:26246494
Biological Process	GO:0036368	cone photoresponse recovery	rcvrna	IGI	ZFIN:ZDB-GENE-030131-7590	Zfish	PMID:26246494
Biological Process	GO:0007602	phototransduction	Rcvrn	IMP	MGI:MGI:3584102	Mouse	PMID:15173221
Biological Process	GO:0051924	regulation of calcium ion transport	Rcvrn	IMP	MGI:MGI:3584102	Mouse	PMID:15173221
Biological Process	GO:0007601	visual perception	Rcvrn	IMP	MGI:MGI:3584102	Mouse	PMID:15173221
Biological Process	GO:0007601	visual perception	Rcvrn	IMP		Rat	PMID:11581204|RGD:6902924
Biological Process	GO:0007601	visual perception	Rcvrn	IDA		Rat	PMID:12598626|RGD:1303366

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern