Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RDH10
  • Mouse genes Rdh10
  • Rat genes Rdh10
  • Zfish genes rdh10a,rdh10b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rdh10

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004745	NAD-retinol dehydrogenase activity	RDH10	IDA		Human	PMID:12407145
Molecular Function	GO:0004745	NAD-retinol dehydrogenase activity	RDH10	IDA		Human	PMID:19458327
Molecular Function	GO:0004745	NAD-retinol dehydrogenase activity	Rdh10	IMP		Mouse	PMID:17473173
Molecular Function	GO:0005515	protein binding	RDH10	IPI	UniProtKB:Q05329	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RDH10	IPI	UniProtKB:Q96CM8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RDH10	IPI	UniProtKB:Q96LZ7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RDH10	IPI	UniProtKB:Q9BW61	Human	PMID:32296183
Cellular Component	GO:0005737	cytoplasm	RDH10	IDA		Human	PMID:19458327
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Rdh10	IDA		Rat	PMID:15505029|RGD:6893666
Cellular Component	GO:0016020	membrane	RDH10	IDA		Human	PMID:19458327
Cellular Component	GO:0016020	membrane	Rdh10	IDA		Mouse	PMID:17473173
Biological Process	GO:0009887	animal organ morphogenesis	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0060449	bud elongation involved in lung branching	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0043583	ear development	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0031076	embryonic camera-type eye development	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0035115	embryonic forelimb morphogenesis	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0048568	embryonic organ development	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0008406	gonad development	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0001701	in utero embryonic development	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0001656	metanephros development	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0014032	neural crest cell development	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0043584	nose development	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:1900054	positive regulation of retinoic acid biosynthetic process	Rdh10	IMP		Rat	PMID:21138835|RGD:6771354
Biological Process	GO:0060431	primary lung bud formation	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0042574	retinal metabolic process	RDH10	IDA		Human	PMID:19458327
Biological Process	GO:0002138	retinoic acid biosynthetic process	Rdh10	IMP		Mouse	PMID:17473173
Biological Process	GO:0002138	retinoic acid biosynthetic process	rdh10a	IMP	ZFIN:ZDB-MRPHLNO-160106-1,ZFIN:ZDB-MRPHLNO-160106-2	Zfish	PMID:26394147
Biological Process	GO:0042572	retinol metabolic process	RDH10	IDA		Human	PMID:19458327
Biological Process	GO:0007601	visual perception	RDH10	IDA		Human	PMID:12407145

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern