Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes REP15
  • Mouse genes Rep15
  • Rat genes Rep15
  • Zfish genes sb:cb470
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rep15

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	REP15	IPI	UniProtKB:P59190	Human	PMID:16195351
Molecular Function	GO:0005515	protein binding	REP15	IPI	UniProtKB:O60447	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	REP15	IPI	UniProtKB:P61952	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	REP15	IPI	UniProtKB:Q15695	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	REP15	IPI	UniProtKB:Q15696	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	REP15	IPI	UniProtKB:Q99856	Human	PMID:32296183
Cellular Component	GO:0010008	endosome membrane	REP15	IDA		Human	PMID:16195351
Cellular Component	GO:0048471	perinuclear region of cytoplasm	REP15	IDA		Human	PMID:16195351
Cellular Component	GO:0055037	recycling endosome	REP15	IDA		Human	PMID:16195351
Biological Process	GO:0001881	receptor recycling	REP15	IMP		Human	PMID:16195351
Biological Process	GO:0033572	transferrin transport	REP15	IDA		Human	PMID:16195351

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern