Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RHO
  • Mouse genes Rho
  • Rat genes Rho
  • Zfish genes rho,rhol
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rho

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008020	G protein-coupled photoreceptor activity	rho	IDA		Zfish	PMID:21416149
Molecular Function	GO:0009881	photoreceptor activity	rhol	IDA		Zfish	PMID:21447259
Molecular Function	GO:0009881	photoreceptor activity	rhol	IDA		Zfish	PMID:27811293
Molecular Function	GO:0009881	photoreceptor activity	rho	IDA		Zfish	PMID:27811293
Molecular Function	GO:0005515	protein binding	RHO	IPI	UniProtKB:P25686-3	Human	PMID:12754272
Molecular Function	GO:0005515	protein binding	RHO	IPI	UniProtKB:O95405	Human	PMID:17693260
Molecular Function	GO:0005515	protein binding	RHO	IPI	UniProtKB:Q92611	Human	PMID:19934218
Molecular Function	GO:0005515	protein binding	RHO	IPI	UniProtKB:P11912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rho	IPI	UniProtKB:Q00LT2	Mouse	MGI:MGI:6271388|PMID:27509380
Molecular Function	GO:0005515	protein binding	Rho	IPI	PR:P39053	Mouse	PMID:23746204
Molecular Function	GO:0005515	protein binding	Rho	IPI	PR:Q61025	Mouse	PMID:21307337
Molecular Function	GO:0005515	protein binding	Rho	IPI	PR:P20612	Mouse	PMID:17881533
Molecular Function	GO:0016918	retinal binding	Rho	IDA		Rat	PMID:2525480|RGD:6893558
Molecular Function	GO:0016918	retinal binding	Rho	IDA		Rat	PMID:8814134|RGD:6893595
Molecular Function	GO:0016918	retinal binding	rhol	IDA		Zfish	PMID:27811293
Molecular Function	GO:0016918	retinal binding	rho	IDA		Zfish	PMID:27811293
Molecular Function	GO:0030507	spectrin binding	Rho	IDA		Rat	PMID:23704327|RGD:8553853
Cellular Component	GO:0005911	cell-cell junction	Rho	IDA		Mouse	PMID:23793062
Cellular Component	GO:0005794	Golgi apparatus	RHO	IDA		Human	PMID:11767049
Cellular Component	GO:0097381	photoreceptor disc membrane	RHO	IDA		Human	PMID:25664179
Cellular Component	GO:0001917	photoreceptor inner segment	RHO	IDA		Human	PMID:11767049
Cellular Component	GO:0001917	photoreceptor inner segment	Rho	IDA		Mouse	MGI:MGI:4456964|PMID:10399916
Cellular Component	GO:0060342	photoreceptor inner segment membrane	RHO	IDA		Human	PMID:19934218
Cellular Component	GO:0001750	photoreceptor outer segment	RHO	IDA		Human	PMID:11767049
Cellular Component	GO:0001750	photoreceptor outer segment	RHO	IDA		Human	PMID:23704327
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:21212183
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:22869374
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:23943788
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:22183407
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:12651948
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:10725384
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:23351594
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:25224828
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:26420485
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Mouse	PMID:20592197
Cellular Component	GO:0001750	photoreceptor outer segment	Rho	IDA		Rat	PMID:8814134|RGD:6893595
Cellular Component	GO:0001750	photoreceptor outer segment	rho	IDA		Zfish	PMID:18492793
Cellular Component	GO:0042622	photoreceptor outer segment membrane	RHO	IDA		Human	PMID:19934218
Cellular Component	GO:0042622	photoreceptor outer segment membrane	Rho	IDA		Rat	PMID:2209754|RGD:6893561
Cellular Component	GO:0005886	plasma membrane	RHO	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005886	plasma membrane	RHO	IDA		Human	PMID:31380578
Cellular Component	GO:0005886	plasma membrane	RHO	IDA		Human	PMID:31730232
Cellular Component	GO:0120200	rod photoreceptor outer segment	Rho	IDA		Mouse	PMID:19332056
Cellular Component	GO:0120200	rod photoreceptor outer segment	Rho	IDA		Mouse	PMID:21444805
Cellular Component	GO:0120200	rod photoreceptor outer segment	Rho	IDA		Mouse	PMID:23178122
Cellular Component	GO:0030867	rough endoplasmic reticulum membrane	Rho	IDA		Rat	PMID:2525480|RGD:6893558
Cellular Component	GO:1990913	sperm head plasma membrane	Rho	IDA		Mouse	PMID:31924821
Cellular Component	GO:0097225	sperm midpiece	Rho	IDA		Mouse	PMID:31924821
Biological Process	GO:0016038	absorption of visible light	rho	IDA		Zfish	PMID:21416149
Biological Process	GO:0071482	cellular response to light stimulus	Rho	IMP		Mouse	PMID:21052544
Biological Process	GO:0009583	detection of light stimulus	Rho	IMP	MGI:MGI:2181812	Mouse	PMID:11747369
Biological Process	GO:0009583	detection of light stimulus	rho	IDA		Zfish	PMID:26098991
Biological Process	GO:0050960	detection of temperature stimulus involved in thermoception	Rho	IGI	MGI:MGI:1353425	Mouse	PMID:31924821
Biological Process	GO:0007186	G protein-coupled receptor signaling pathway	RHO	IMP		Human	PMID:2218504
Biological Process	GO:0045494	photoreceptor cell maintenance	Rho	IMP		Mouse	MGI:MGI:6508517|PMID:32312889
Biological Process	GO:0045494	photoreceptor cell maintenance	Rho	IMP	MGI:MGI:5609882	Mouse	PMID:22183357
Biological Process	GO:0007602	phototransduction	Rho	IMP	MGI:MGI:2181812	Mouse	PMID:16723493
Biological Process	GO:0006468	protein phosphorylation	Rho	IDA		Mouse	PMID:10097103
Biological Process	GO:0009585	red, far-red light phototransduction	Rho	IDA		Rat	PMID:2525480|RGD:6893558
Biological Process	GO:0009416	response to light stimulus	Rho	IMP	MGI:MGI:2181812	Mouse	PMID:16723493
Biological Process	GO:0060041	retina development in camera-type eye	Rho	IMP		Mouse	PMID:21052544
Biological Process	GO:0016056	rhodopsin mediated signaling pathway	Rho	IDA		Rat	PMID:8814134|RGD:6893595
Biological Process	GO:0050953	sensory perception of light stimulus	Rho	IMP	MGI:MGI:2181812	Mouse	PMID:16723493
Biological Process	GO:0043052	thermotaxis	Rho	IGI	MGI:MGI:1353425	Mouse	PMID:31924821
Biological Process	GO:0007601	visual perception	Rho	IMP	MGI:MGI:2181812	Mouse	PMID:22937111

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern