Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RILP
  • Mouse genes Rilp
  • Rat genes Rilp
  • Zfish genes rilp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rilp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051959	dynein light intermediate chain binding	RILP	IPI	UniProtKB:Q9Y6G9	Human	PMID:25272277
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:P51149	Human	PMID:15933719
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:Q86VN1	Human	PMID:17010938
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:Q96H20	Human	PMID:17010938
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:Q96H20	Human	PMID:17959629
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:P51149	Human	PMID:18787122
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:Q13286	Human	PMID:22261744
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:P49754	Human	PMID:25445562
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:P51149	Human	PMID:25500191
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:P51149	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:Q8NFG4	Human	PMID:27113757
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:P51149	Human	PMID:30721249
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:P37173	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:P51149	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RILP	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Rilp	IPI	PR:P51150	Mouse	PMID:22275436
Molecular Function	GO:0005515	protein binding	Rilp	IPI	PR:Q6NVG5	Mouse	PMID:22275436
Molecular Function	GO:0005515	protein binding	Rilp	IPI	PR:Q64008	Mouse	PMID:22275436
Molecular Function	GO:0031267	small GTPase binding	RILP	IPI	UniProtKB:P51149	Human	PMID:18272684
Molecular Function	GO:0031267	small GTPase binding	RILP	IPI	UniProtKB:P51149	Human	PMID:26911690
Cellular Component	GO:0005770	late endosome	RILP	IDA		Human	PMID:17010938
Cellular Component	GO:0005770	late endosome	RILP	IDA		Human	PMID:18272684
Cellular Component	GO:0005764	lysosome	RILP	IDA		Human	PMID:18272684
Cellular Component	GO:0005739	mitochondrion	Rilp	HDA		Mouse	PMID:18614015
Cellular Component	GO:0032991	protein-containing complex	Rilp	IDA		Mouse	PMID:22275436
Biological Process	GO:0045022	early endosome to late endosome transport	RILP	IMP		Human	PMID:17959629
Biological Process	GO:0008333	endosome to lysosome transport	RILP	IMP		Human	PMID:18272684
Biological Process	GO:0032509	endosome transport via multivesicular body sorting pathway	RILP	IDA		Human	PMID:17010938
Biological Process	GO:0070676	intralumenal vesicle formation	RILP	IMP		Human	PMID:17959629
Biological Process	GO:0042177	negative regulation of protein catabolic process	RILP	IDA		Human	PMID:17010938
Biological Process	GO:0045732	positive regulation of protein catabolic process	RILP	IMP		Human	PMID:17959629
Biological Process	GO:0010796	regulation of multivesicular body size	RILP	IDA		Human	PMID:17010938

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern