Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RIOK2
  • Mouse genes Riok2
  • Rat genes Riok2
  • Zfish genes riok2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Riok2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RIOK2	IPI	UniProtKB:P53350	Human	PMID:21880710
Cellular Component	GO:0005737	cytoplasm	RIOK2	IMP		Human	PMID:19564402
Cellular Component	GO:0030688	preribosome, small subunit precursor	RIOK2	IDA		Human	PMID:19564402
Biological Process	GO:0030490	maturation of SSU-rRNA	RIOK2	IMP		Human	PMID:19564402
Biological Process	GO:2000208	positive regulation of ribosomal small subunit export from nucleus	RIOK2	IMP		Human	PMID:19564402
Biological Process	GO:2000234	positive regulation of rRNA processing	RIOK2	IDA		Human	PMID:19564402
Biological Process	GO:0046777	protein autophosphorylation	RIOK2	IMP		Human	PMID:21880710
Biological Process	GO:0030071	regulation of mitotic metaphase/anaphase transition	RIOK2	IMP		Human	PMID:21880710
Biological Process	GO:0042274	ribosomal small subunit biogenesis	RIOK2	IMP		Human	PMID:19564402

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern