Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RIPK4
  • Mouse genes Ripk4
  • Rat genes Ripk4
  • Zfish genes ripk4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ripk4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RIPK4	IPI	UniProtKB:P98170	Human	PMID:21931591
Molecular Function	GO:0005515	protein binding	RIPK4	IPI	UniProtKB:Q13489	Human	PMID:21931591
Molecular Function	GO:0005515	protein binding	RIPK4	IPI	UniProtKB:Q13490	Human	PMID:21931591
Molecular Function	GO:0005515	protein binding	RIPK4	IPI	UniProtKB:O14641	Human	PMID:23371553
Molecular Function	GO:0005515	protein binding	RIPK4	IPI	UniProtKB:Q9NWT6	Human	PMID:26972000
Molecular Function	GO:0005515	protein binding	Ripk4	IPI	UniProtKB:Q6Q0C0	Mouse	MGI:MGI:5292417|PMID:21903422
Cellular Component	GO:0005737	cytoplasm	Ripk4	IDA		Mouse	MGI:MGI:5317967|PMID:22197488
Biological Process	GO:0002009	morphogenesis of an epithelium	RIPK4	IMP		Human	PMID:22197488
Biological Process	GO:0051092	positive regulation of NF-kappaB transcription factor activity	RIPK4	IMP		Human	PMID:21931591

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern