Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RIPPLY2
  • Mouse genes Ripply2
  • Rat genes Ripply2
  • Zfish genes ripply1,ripply2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ripply2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q05BK6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q8N205	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q8N6L0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q8N6L0	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:P17568	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:P40425	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q3SXR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q5T686	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q8N6L0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q8NBJ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q9BYU1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:P26378-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RIPPLY2	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ripply1	IPI	UniProtKB:O13166	Zfish	PMID:16326386|ZFIN:ZDB-PUB-051214-10
Molecular Function	GO:0005515	protein binding	ripply1	IPI	ZFIN:ZDB-GENE-020416-5	Zfish	PMID:25259583
Cellular Component	GO:0005634	nucleus	ripply1	IDA		Zfish	PMID:16326386
Biological Process	GO:0009798	axis specification	Ripply2	IMP	MGI:MGI:3513254	Mouse	PMID:17531978
Biological Process	GO:0060349	bone morphogenesis	Ripply2	IGI	MGI:MGI:3614797	Mouse	PMID:20346937
Biological Process	GO:0007368	determination of left/right symmetry	Ripply2	IMP	MGI:MGI:3513254	Mouse	PMID:17531978
Biological Process	GO:0009880	embryonic pattern specification	ripply1	IMP	ZFIN:ZDB-MRPHLNO-060113-5	Zfish	PMID:16326386
Biological Process	GO:0009880	embryonic pattern specification	ripply1	IMP	ZFIN:ZDB-MRPHLNO-060113-6	Zfish	PMID:16326386
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	ripply1	IMP		Zfish	PMID:16326386|ZFIN:ZDB-PUB-051214-10
Biological Process	GO:0007219	Notch signaling pathway	Ripply2	IGI	MGI:MGI:3614797	Mouse	PMID:20346937
Biological Process	GO:0001503	ossification	Ripply2	IMP	MGI:MGI:3513254	Mouse	PMID:17531978
Biological Process	GO:0036342	post-anal tail morphogenesis	Ripply2	IMP	MGI:MGI:3513254	Mouse	PMID:17531978
Biological Process	GO:0010468	regulation of gene expression	Ripply2	IGI	MGI:MGI:3614797	Mouse	PMID:20346937
Biological Process	GO:0048641	regulation of skeletal muscle tissue development	ripply1	IMP	ZFIN:ZDB-MRPHLNO-060113-5	Zfish	PMID:25725067
Biological Process	GO:0061053	somite development	ripply1	IMP	ZFIN:ZDB-GENO-190214-8	Zfish	PMID:29879477
Biological Process	GO:0032525	somite rostral/caudal axis specification	Ripply2	IDA		Mouse	MGI:MGI:3613215|PMID:16326386
Biological Process	GO:0032525	somite rostral/caudal axis specification	Ripply2	IGI	MGI:MGI:3614797	Mouse	PMID:20346937
Biological Process	GO:0032525	somite rostral/caudal axis specification	ripply1	IMP		Zfish	PMID:16326386|ZFIN:ZDB-PUB-051214-10
Biological Process	GO:0001757	somite specification	ripply1	IMP	ZFIN:ZDB-MRPHLNO-060113-5	Zfish	PMID:16326386
Biological Process	GO:0001757	somite specification	ripply1	IMP	ZFIN:ZDB-MRPHLNO-060113-6	Zfish	PMID:16326386
Biological Process	GO:0001756	somitogenesis	Ripply2	IDA		Mouse	MGI:MGI:3613215|PMID:16326386
Biological Process	GO:0001756	somitogenesis	Ripply2	IMP	MGI:MGI:3513254	Mouse	PMID:17531978
Biological Process	GO:0001756	somitogenesis	ripply1	IGI	ZFIN:ZDB-MRPHLNO-050316-2,ZFIN:ZDB-MRPHLNO-060113-5	Zfish	PMID:24284210

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern