Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RIPPLY3
  • Mouse genes Ripply3
  • Rat genes Ripply3
  • Zfish genes ripply3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ripply3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RIPPLY3	IPI	UniProtKB:O43435	Human	PMID:30241482
Molecular Function	GO:0005515	protein binding	RIPPLY3	IPI	UniProtKB:P20618	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY3	IPI	UniProtKB:Q0VD86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY3	IPI	UniProtKB:Q12933	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY3	IPI	UniProtKB:Q13416	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY3	IPI	UniProtKB:Q8TAP6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY3	IPI	UniProtKB:Q96CG3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RIPPLY3	IPI	UniProtKB:Q96EZ8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ripply3	IPI	UniProtKB:P70323	Mouse	MGI:MGI:4879036|PMID:21177346
Biological Process	GO:0008283	cell population proliferation	Ripply3	IMP	MGI:MGI:4880754	Mouse	PMID:25053427
Biological Process	GO:0007507	heart development	Ripply3	IMP		Mouse	MGI:MGI:4879036|PMID:21177346
Biological Process	GO:0008285	negative regulation of cell population proliferation	Ripply3	IMP	MGI:MGI:4880754	Mouse	PMID:25053427
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Ripply3	IDA		Mouse	MGI:MGI:4879036|PMID:21177346
Biological Process	GO:0060037	pharyngeal system development	Ripply3	IMP		Mouse	MGI:MGI:4879036|PMID:21177346
Biological Process	GO:0003139	secondary heart field specification	ripply3	IMP	ZFIN:ZDB-GENO-201105-9	Zfish	PMID:31091225

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern