Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RLBP1
  • Mouse genes Rlbp1
  • Rat genes Rlbp1
  • Zfish genes rlbp1a,rlbp1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rlbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005502	11-cis retinal binding	Rlbp1	IDA		Mouse	PMID:9326942
Molecular Function	GO:0005515	protein binding	RLBP1	IPI	UniProtKB:Q9P2G9-2	Human	PMID:32296183
Cellular Component	GO:0044297	cell body	Rlbp1	IDA		Rat	PMID:19180257|RGD:6893662
Cellular Component	GO:0005813	centrosome	RLBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	RLBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RLBP1	IDA		Human	GO_REF:0000052
Biological Process	GO:0007634	optokinetic behavior	rlbp1a	IMP	ZFIN:ZDB-MRPHLNO-090212-4	Zfish	PMID:18502992
Biological Process	GO:0007634	optokinetic behavior	rlbp1b	IMP	ZFIN:ZDB-MRPHLNO-090212-3	Zfish	PMID:18502992
Biological Process	GO:0009416	response to light stimulus	rlbp1a	IMP	ZFIN:ZDB-MRPHLNO-090126-4	Zfish	PMID:18701683
Biological Process	GO:0009416	response to light stimulus	rlbp1b	IMP	ZFIN:ZDB-MRPHLNO-090126-3	Zfish	PMID:18701683

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern