Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RNF19A
  • Mouse genes Rnf19a
  • Rat genes Rnf19a
  • Zfish genes rnf19a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rnf19a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RNF19A	IPI	UniProtKB:P00441	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Rnf19a	IPI	UniProtKB:Q9Z0P7	Mouse	MGI:MGI:5009176|PMID:14611647
Cellular Component	GO:0098978	glutamatergic synapse	Rnf19a	EXP		Mouse	PMID:26553645
Cellular Component	GO:0098978	glutamatergic synapse	Rnf19a	IMP		Mouse	PMID:26553645
Cellular Component	GO:0098978	glutamatergic synapse	Rnf19a	IDA		Mouse	PMID:26553645
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Rnf19a	IDA		Mouse	PMID:26553645
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Rnf19a	IMP		Mouse	PMID:26553645
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Rnf19a	EXP		Mouse	PMID:26553645
Cellular Component	GO:0098794	postsynapse	Rnf19a	IMP		Mouse	MGI:MGI:6100219|PMID:26553645
Biological Process	GO:0099576	regulation of protein catabolic process at postsynapse, modulating synaptic transmission	Rnf19a	IDA		Mouse	PMID:26553645
Biological Process	GO:0099576	regulation of protein catabolic process at postsynapse, modulating synaptic transmission	Rnf19a	IMP		Mouse	PMID:26553645
Biological Process	GO:0099576	regulation of protein catabolic process at postsynapse, modulating synaptic transmission	Rnf19a	EXP		Mouse	PMID:26553645

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern