Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RNF20
  • Mouse genes Rnf20
  • Rat genes Rnf20
  • Zfish genes rnf20
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rnf20

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Rnf20	IDA		Mouse	PMID:22252316
Molecular Function	GO:0042393	histone binding	RNF20	IDA		Human	PMID:16337599
Molecular Function	GO:0140850	histone H2B C-terminal K residue ubiquitin ligase activity	RNF20	IMP		Human	PMID:16337599
Molecular Function	GO:0140850	histone H2B C-terminal K residue ubiquitin ligase activity	Rnf20	IMP		Mouse	PMID:22252316
Molecular Function	GO:0042802	identical protein binding	RNF20	IPI	UniProtKB:Q5VTR2	Human	PMID:32296183
Molecular Function	GO:0003730	mRNA 3'-UTR binding	RNF20	IDA		Human	PMID:19575011
Molecular Function	GO:0002039	p53 binding	RNF20	IDA		Human	PMID:16337599
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:O75150	Human	PMID:16307923
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:P51965	Human	PMID:16307923
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:P42858	Human	PMID:17500595
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q9UQ80	Human	PMID:19037095
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q92905	Human	PMID:19214193
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:O75150	Human	PMID:19410543
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q9BTA9	Human	PMID:21329877
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:P42858	Human	PMID:23275563
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q8N6Y0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q9Y2J4-4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:O96017	Human	PMID:25640309
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q9Y2J4	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q09161	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q6P1J9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q9NX04	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q9Y2J4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q9Y6A5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RNF20	IPI	UniProtKB:Q8WUW1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Rnf20	IPI	PR:Q3U319	Mouse	PMID:22252316
Molecular Function	GO:0003713	transcription coactivator activity	RNF20	IDA		Human	PMID:16337599
Molecular Function	GO:0031625	ubiquitin protein ligase binding	RNF20	IPI	UniProtKB:O75150	Human	PMID:16307923
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	RNF20	IDA		Human	PMID:16307923
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	RNF20	IDA		Human	PMID:19037095
Cellular Component	GO:0033503	HULC complex	RNF20	IDA		Human	PMID:19410543
Cellular Component	GO:0005730	nucleolus	RNF20	IDA		Human	PMID:19037095
Cellular Component	GO:0005654	nucleoplasm	RNF20	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RNF20	IDA		Human	PMID:16307923
Cellular Component	GO:0000151	ubiquitin ligase complex	RNF20	IDA		Human	PMID:16307923
Biological Process	GO:0030336	negative regulation of cell migration	RNF20	IDA		Human	PMID:18832071
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	RNF20	IMP		Human	PMID:16713563
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	RNF20	IDA		Human	PMID:16307923
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	RNF20	IDA		Human	PMID:16337599
Biological Process	GO:0000209	protein polyubiquitination	RNF20	IDA		Human	PMID:19037095
Biological Process	GO:0006355	regulation of DNA-templated transcription	RNF20	IMP		Human	PMID:18832071
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	RNF20	IMP		Human	PMID:19037095

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern