Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RNF25
  • Mouse genes Rnf25
  • Rat genes Rnf25
  • Zfish genes rnf25
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rnf25

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051059	NF-kappaB binding	RNF25	IPI	UniProtKB:Q04206	Human	PMID:12748188
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q969F2	Human	PMID:18757723
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P51668	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P51965	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P61077	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P62837	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q969T4	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q9Y2X8	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P51668	Human	PMID:19690564
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P51965	Human	PMID:19690564
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P61077	Human	PMID:19690564
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P62837	Human	PMID:19690564
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q969T4	Human	PMID:19690564
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q9Y2X8	Human	PMID:19690564
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P51965	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P62837	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q969T4	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q9Y2X8	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P51668	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:P61077	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q4G0X4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RNF25	IPI	UniProtKB:O60260-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Rnf25	IPI	UniProtKB:Q969F2	Mouse	MGI:MGI:4820713|PMID:18757723
Molecular Function	GO:0061630	ubiquitin protein ligase activity	Rnf25	IDA		Mouse	PMID:18757723
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	Rnf25	IDA		Mouse	MGI:MGI:4820713|PMID:18757723
Cellular Component	GO:0005829	cytosol	RNF25	IDA		Human	PMID:12748188
Cellular Component	GO:0005634	nucleus	RNF25	IDA		Human	PMID:12748188
Biological Process	GO:0090263	positive regulation of canonical Wnt signaling pathway	rnf25	IMP	ZFIN:ZDB-GENO-180522-3	Zfish	PMID:27007149
Biological Process	GO:0051092	positive regulation of NF-kappaB transcription factor activity	RNF25	IDA		Human	PMID:12748188
Biological Process	GO:0016567	protein ubiquitination	Rnf25	IDA		Mouse	MGI:MGI:4820713|PMID:18757723

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern