Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RNPC3
  • Mouse genes Rnpc3
  • Rat genes Rnpc3
  • Zfish genes rnpc3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rnpc3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005654	nucleoplasm	RNPC3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RNPC3	IDA		Human	PMID:18559850
Cellular Component	GO:0005689	U12-type spliceosomal complex	RNPC3	IDA		Human	PMID:15146077
Biological Process	GO:0048565	digestive tract development	rnpc3	IMP	ZFIN:ZDB-GENO-110620-1	Zfish	PMID:24516132
Biological Process	GO:0001889	liver development	rnpc3	IMP	ZFIN:ZDB-GENO-110620-1	Zfish	PMID:24516132
Biological Process	GO:0000398	mRNA splicing, via spliceosome	rnpc3	IMP	ZFIN:ZDB-GENO-110620-1	Zfish	PMID:24516132
Biological Process	GO:0031016	pancreas development	rnpc3	IMP	ZFIN:ZDB-GENO-110620-1	Zfish	PMID:24516132

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern