Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RNPEP
  • Mouse genes Rnpep
  • Rat genes Rnpep
  • Zfish genes rnpep
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rnpep

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004177	aminopeptidase activity	Rnpep	IDA		Rat	PMID:16537183|RGD:1581649
Molecular Function	GO:0004177	aminopeptidase activity	Rnpep	IDA		Rat	PMID:8940051|RGD:729854
Molecular Function	GO:0004177	aminopeptidase activity	Rnpep	IDA		Rat	PMID:9405297|RGD:2325944
Molecular Function	GO:0050897	cobalt ion binding	Rnpep	IDA		Rat	PMID:17142967|RGD:2325932
Molecular Function	GO:0005507	copper ion binding	Rnpep	IDA		Rat	PMID:17142967|RGD:2325932
Molecular Function	GO:0070006	metalloaminopeptidase activity	Rnpep	IDA		Rat	PMID:17142967|RGD:2325932
Molecular Function	GO:0042277	peptide binding	Rnpep	IDA		Rat	PMID:16537183|RGD:1581649
Molecular Function	GO:0008270	zinc ion binding	Rnpep	IDA		Rat	PMID:17142967|RGD:2325932
Cellular Component	GO:0009897	external side of plasma membrane	Rnpep	IDA		Rat	PMID:9405297|RGD:2325944
Cellular Component	GO:0070062	extracellular exosome	RNPEP	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	RNPEP	HDA		Human	PMID:19199708
Cellular Component	GO:0070062	extracellular exosome	RNPEP	HDA		Human	PMID:23533145
Cellular Component	GO:0005576	extracellular region	RNPEP	HDA		Human	PMID:27068509
Cellular Component	GO:0005576	extracellular region	Rnpep	IDA		Rat	PMID:9405297|RGD:2325944
Cellular Component	GO:0005615	extracellular space	Rnpep	IDA		Rat	PMID:16619500|RGD:1582109
Cellular Component	GO:0005794	Golgi apparatus	Rnpep	IDA		Rat	PMID:9405297|RGD:2325944
Cellular Component	GO:0043005	neuron projection	Rnpep	IDA		Rat	PMID:2099537|RGD:2325948
Cellular Component	GO:0005886	plasma membrane	Rnpep	IDA		Rat	PMID:9405297|RGD:2325944
Cellular Component	GO:0030141	secretory granule	Rnpep	IDA		Rat	PMID:15539558|RGD:2325936
Biological Process	GO:0007568	aging	Rnpep	IEP		Rat	PMID:8477833|RGD:2325947
Biological Process	GO:0045776	negative regulation of blood pressure	Rnpep	IMP		Rat	PMID:3001599|RGD:2325950
Biological Process	GO:0016485	protein processing	Rnpep	IDA		Rat	PMID:16537183|RGD:1581649
Biological Process	GO:0060041	retina development in camera-type eye	Rnpep	IEP		Rat	PMID:15500823|RGD:2325937

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern