Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPAP2
  • Mouse genes Rpap2
  • Rat genes Rpap2
  • Zfish genes rpap2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpap2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPAP2	IPI	UniProtKB:Q9NWS0	Human	PMID:24656813
Molecular Function	GO:0005515	protein binding	RPAP2	IPI	UniProtKB:Q9HCN4	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	RPAP2	IPI	UniProtKB:Q9NQG5	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	RPAP2	IPI	UniProtKB:Q96P16-1	Human	PMID:24997600
Molecular Function	GO:0005515	protein binding	RPAP2	IPI	UniProtKB:Q9NQG5	Human	PMID:24997600
Molecular Function	GO:0005515	protein binding	RPAP2	IPI	UniProtKB:Q9H8W4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPAP2	IPI	UniProtKB:Q9HCN4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPAP2	IPI	UniProtKB:Q9NWS0	Human	PMID:32296183
Molecular Function	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	RPAP2	IMP		Human	PMID:22137580
Cellular Component	GO:0005737	cytoplasm	RPAP2	IDA		Human	PMID:22137580
Cellular Component	GO:0005829	cytosol	RPAP2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	RPAP2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RPAP2	IDA		Human	PMID:22137580
Cellular Component	GO:0097550	transcription preinitiation complex	RPAP2	IDA		Human	PMID:22231121
Biological Process	GO:0009301	snRNA transcription	RPAP2	IMP		Human	PMID:22137580

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern