Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPGRIP1
  • Mouse genes Rpgrip1
  • Rat genes
  • Zfish genes rpgrip1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpgrip1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:O75161	Human	PMID:21224891
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q9P0W8	Human	PMID:25398945
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:O15479	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:P0C1Z6-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q1MSJ5-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q5TZK3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q7L190	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q8IYE0-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q8N5L8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q8TAU3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q8TBZ8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q8WTP8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q8WXI9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q92834	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q96JP0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q96RU7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q9BWG6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q9HC52	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q9NQ87	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q9NX63	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q9P0N9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q9Y3M9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:O75161	Human	PMID:26638075
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q92834	Human	PMID:26638075
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q92834	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	RPGRIP1	IPI	UniProtKB:Q92834	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Rpgrip1	IPI	MGI:MGI:2144877	Mouse	PMID:29899041
Molecular Function	GO:0005515	protein binding	Rpgrip1	IPI	PR:Q9R0X5	Mouse	PMID:11104772
Molecular Function	GO:0005515	protein binding	Rpgrip1	IPI	PR:Q9EPQ2	Mouse	PMID:11104772
Cellular Component	GO:0005930	axoneme	Rpgrip1	IDA		Mouse	PMID:11104772
Cellular Component	GO:0005929	cilium	Rpgrip1	IDA		Mouse	PMID:12651948
Cellular Component	GO:0043005	neuron projection	Rpgrip1	IDA		Mouse	PMID:20592197
Cellular Component	GO:0097730	non-motile cilium	Rpgrip1	IDA		Mouse	PMID:20592197
Cellular Component	GO:0032391	photoreceptor connecting cilium	Rpgrip1	IDA		Mouse	MGI:MGI:5608598|PMID:25398945
Cellular Component	GO:0120206	photoreceptor distal connecting cilium	Rpgrip1	IDA		Mouse	PMID:29899041
Biological Process	GO:0042462	eye photoreceptor cell development	Rpgrip1	IMP	MGI:MGI:2655714	Mouse	PMID:12651948
Biological Process	GO:0061351	neural precursor cell proliferation	Rpgrip1	IMP	MGI:MGI:3716208	Mouse	PMID:18297065
Biological Process	GO:0035845	photoreceptor cell outer segment organization	rpgrip1	IMP	ZFIN:ZDB-GENO-180515-1	Zfish	PMID:29203866
Biological Process	GO:0060041	retina development in camera-type eye	Rpgrip1	IMP		Mouse	PMID:21052544
Biological Process	GO:0046548	retinal rod cell development	rpgrip1	IMP	ZFIN:ZDB-GENO-180515-1	Zfish	PMID:29203866
Biological Process	GO:0007601	visual perception	Rpgrip1	IMP	MGI:MGI:2655714	Mouse	PMID:12651948

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern