Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL12
  • Mouse genes Rpl12
  • Rat genes LOC102555453,RGD1563956,Rpl12,Rpl12-ps1
  • Zfish genes rpl12
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl12

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070180	large ribosomal subunit rRNA binding	Rpl12	IDA		Rat	PMID:8530386|RGD:11035233
Molecular Function	GO:0070180	large ribosomal subunit rRNA binding	Rpl12	IDA		Rat	PMID:9013569|RGD:11035231
Molecular Function	GO:0005515	protein binding	RPL12	IPI	UniProtKB:P27824	Human	PMID:22314232
Molecular Function	GO:0005515	protein binding	Rpl12	IPI	UniProtKB:Q9NVB1	Mouse	PMID:11809816
Molecular Function	GO:0003723	RNA binding	RPL12	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPL12	IDA		Human	PMID:23636399
Cellular Component	GO:0005737	cytoplasm	Rpl12	IDA		Mouse	PMID:11809816
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL12	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL12	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl12	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl12	IDA		Rat	PMID:3426607|RGD:11036078
Cellular Component	GO:0022626	cytosolic ribosome	RPL12	IDA		Human	PMID:23636399
Cellular Component	GO:0070062	extracellular exosome	RPL12	HDA		Human	PMID:20458337
Cellular Component	GO:0005925	focal adhesion	RPL12	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	RPL12	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	Rpl12	IDA		Mouse	PMID:11809816
Cellular Component	GO:0005634	nucleus	Rpl12	IDA		Mouse	PMID:11809816
Cellular Component	GO:0014069	postsynaptic density	RPL12	EXP		Human	PMID:21170055
Cellular Component	GO:0014069	postsynaptic density	RPL12	IDA		Human	PMID:21170055
Cellular Component	GO:0045202	synapse	Rpl12	IDA		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rpl12	EXP		Mouse	PMID:25211037
Biological Process	GO:0045901	positive regulation of translational elongation	Rpl12	IDA		Rat	PMID:11729183|RGD:11035234

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern