Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL28
  • Mouse genes Rpl28
  • Rat genes RGD1565183,Rpl28
  • Zfish genes rpl28
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl28

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPL28	IPI	UniProtKB:P43146	Human	PMID:20434207
Molecular Function	GO:0005515	protein binding	RPL28	IPI	UniProtKB:O95273	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	RPL28	IPI	UniProtKB:O95273	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPL28	IPI	UniProtKB:P10636	Human	PMID:26402096
Molecular Function	GO:0005515	protein binding	RPL28	IPI	UniProtKB:P36578	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RPL28	IPI	UniProtKB:P36578	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	RPL28	IPI	UniProtKB:O95273	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPL28	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	RPL28	HDA		Human	PMID:22658674
Molecular Function	GO:0003735	structural constituent of ribosome	RPL28	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPL28	IDA		Human	PMID:32669547
Molecular Function	GO:0003735	structural constituent of ribosome	Rpl28	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0044297	cell body	RPL28	IDA		Human	PMID:15121898
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	RPL28	IDA		Human	PMID:15121898
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL28	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL28	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL28	IDA		Human	PMID:32669547
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl28	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl28	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl28	IDA		Rat	PMID:3426607|RGD:11036078
Cellular Component	GO:0022626	cytosolic ribosome	RPL28	IDA		Human	PMID:23636399
Cellular Component	GO:0030425	dendrite	RPL28	IDA		Human	PMID:15121898
Cellular Component	GO:0070062	extracellular exosome	RPL28	HDA		Human	PMID:20458337
Cellular Component	GO:0016020	membrane	RPL28	HDA		Human	PMID:19946888
Cellular Component	GO:0045202	synapse	Rpl28	EXP		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rpl28	IDA		Mouse	PMID:25211037
Biological Process	GO:0043009	chordate embryonic development	rpl28	IMP	ZFIN:ZDB-MRPHLNO-070327-9	Zfish	PMID:17183665

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern