Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL3
  • Mouse genes Rpl3
  • Rat genes Rpl3
  • Zfish genes rpl3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008097	5S rRNA binding	Rpl3	IDA		Rat	PMID:3301408|RGD:11036099
Molecular Function	GO:0005515	protein binding	RPL3	IPI	UniProtKB:O95568	Human	PMID:23349634
Molecular Function	GO:0005515	protein binding	RPL3	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RPL3	IPI	UniProtKB:Q77YB1	Human	PMID:25854864
Molecular Function	GO:0005515	protein binding	RPL3	IPI	UniProtKB:Q9H6R0	Human	PMID:26100019
Molecular Function	GO:0005515	protein binding	RPL3	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	RPL3	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPL3	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPL3	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPL3	IDA		Human	PMID:32669547
Molecular Function	GO:0003735	structural constituent of ribosome	Rpl3	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0005737	cytoplasm	RPL3	HDA		Human	PMID:16791210
Cellular Component	GO:0005829	cytosol	RPL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL3	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL3	IDA		Human	PMID:32669547
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl3	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl3	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl3	IDA		Rat	PMID:7451403|RGD:11036084
Cellular Component	GO:0022626	cytosolic ribosome	RPL3	IDA		Human	PMID:32669547
Cellular Component	GO:0022626	cytosolic ribosome	RPL3	IDA		Human	PMID:23636399
Cellular Component	GO:0070062	extracellular exosome	RPL3	HDA		Human	PMID:20458337
Cellular Component	GO:0005925	focal adhesion	RPL3	HDA		Human	PMID:21423176
Cellular Component	GO:0005730	nucleolus	RPL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	RPL3	HDA		Human	PMID:16791210
Cellular Component	GO:0005730	nucleolus	RPL3	IDA		Human	PMID:16963496
Cellular Component	GO:0005634	nucleus	RPL3	HDA		Human	PMID:21630459
Cellular Component	GO:0032991	protein-containing complex	RPL3	IDA		Human	PMID:23349634
Cellular Component	GO:0005840	ribosome	Rpl3	IDA		Rat	PMID:3730400|RGD:11036081
Cellular Component	GO:0045202	synapse	Rpl3	EXP		Rat	PMID:14720225|RGD:13702309
Cellular Component	GO:0045202	synapse	Rpl3	IDA		Rat	PMID:14720225|RGD:13702309
Biological Process	GO:0071353	cellular response to interleukin-4	Rpl3	IDA		Mouse	PMID:9798653
Biological Process	GO:0031017	exocrine pancreas development	rpl3	IMP	ZFIN:ZDB-MRPHLNO-120820-1	Zfish	PMID:22872088

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern