Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL30
  • Mouse genes Rpl30
  • Rat genes Rpl30,Rpl30l2
  • Zfish genes rpl30
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl30

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPL30	IPI	UniProtKB:Q8IWS0	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	RPL30	IPI	UniProtKB:Q5S007	Human	PMID:24725412
Molecular Function	GO:0005515	protein binding	RPL30	IPI	UniProtKB:Q5S007	Human	PMID:31046837
Molecular Function	GO:0003723	RNA binding	RPL30	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPL30	HDA		Human	PMID:22681889
Molecular Function	GO:0035368	selenocysteine insertion sequence binding	Rpl30	IDA		Rat	PMID:15821744|RGD:11038818
Molecular Function	GO:0003735	structural constituent of ribosome	RPL30	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPL30	IDA		Human	PMID:32669547
Molecular Function	GO:0003735	structural constituent of ribosome	Rpl30	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL30	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL30	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL30	IDA		Human	PMID:25957688
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL30	IDA		Human	PMID:32669547
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl30	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl30	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl30	IDA		Rat	PMID:7451403|RGD:11036084
Cellular Component	GO:0022626	cytosolic ribosome	RPL30	IDA		Human	PMID:23636399
Cellular Component	GO:0070062	extracellular exosome	RPL30	HDA		Human	PMID:20458337
Cellular Component	GO:0005925	focal adhesion	RPL30	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	RPL30	HDA		Human	PMID:19946888
Cellular Component	GO:0005634	nucleus	RPL30	IDA		Human	PMID:22720776
Cellular Component	GO:0042788	polysomal ribosome	RPL30	IDA		Human	PMID:25957688
Cellular Component	GO:0014069	postsynaptic density	RPL30	EXP		Human	PMID:21170055
Cellular Component	GO:0014069	postsynaptic density	RPL30	IDA		Human	PMID:21170055
Cellular Component	GO:0014069	postsynaptic density	Rpl30	IDA		Mouse	PMID:25211037
Cellular Component	GO:0014069	postsynaptic density	Rpl30	EXP		Mouse	PMID:25211037
Cellular Component	GO:0005840	ribosome	Rpl30	IDA		Rat	PMID:3730400|RGD:11036081
Cellular Component	GO:0045202	synapse	Rpl30	EXP		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rpl30	IDA		Mouse	PMID:25211037
Biological Process	GO:0061844	antimicrobial humoral immune response mediated by antimicrobial peptide	RPL30	IDA		Human	PMID:15019208
Biological Process	GO:0002181	cytoplasmic translation	RPL30	IDA		Human	PMID:25957688
Biological Process	GO:0050829	defense response to Gram-negative bacterium	RPL30	IDA		Human	PMID:15019208
Biological Process	GO:0031640	killing of cells of another organism	RPL30	IDA		Human	PMID:15019208
Biological Process	GO:0097421	liver regeneration	Rpl30	IEP		Rat	PMID:6121318|RGD:11038709
Biological Process	GO:1904571	positive regulation of selenocysteine incorporation	Rpl30	IDA		Rat	PMID:15821744|RGD:11038818

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern