Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL34
  • Mouse genes Rpl34
  • Rat genes Rpl34,Rpl34-ps1
  • Zfish genes rpl34
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl34

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	RPL34	HDA		Human	PMID:25468996
Molecular Function	GO:0005515	protein binding	RPL34	IPI	UniProtKB:Q5S007	Human	PMID:24725412
Molecular Function	GO:0005515	protein binding	RPL34	IPI	UniProtKB:Q5S007	Human	PMID:31046837
Molecular Function	GO:0005515	protein binding	Rpl34	IPI	UniProtKB:A0A0G2K916,UniProtKB:B2GV38,UniProtKB:B5DFN4,UniProtKB:D3Z941,UniProtKB:D4AA63,UniProtKB:F1M853,UniProtKB:P51593,UniProtKB:P61107,UniProtKB:P62718,UniProtKB:P97612,UniProtKB:Q09167,UniProtKB:Q498M4,UniProtKB:Q5PPJ6,UniProtKB:Q5PPK9,UniProtKB:Q63569,UniProtKB:Q6AYJ7	Rat	PMID:27191843|RGD:11344934
Molecular Function	GO:0003735	structural constituent of ribosome	RPL34	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPL34	IDA		Human	PMID:32669547
Molecular Function	GO:0003735	structural constituent of ribosome	Rpl34	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0005829	cytosol	RPL34	IDA		Human	GO_REF:0000052
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL34	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL34	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL34	IDA		Human	PMID:32669547
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl34	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl34	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl34	IDA		Rat	PMID:863909|RGD:11036088
Cellular Component	GO:0022626	cytosolic ribosome	RPL34	IDA		Human	PMID:23636399
Cellular Component	GO:0005783	endoplasmic reticulum	RPL34	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	RPL34	HDA		Human	PMID:20458337
Cellular Component	GO:0005739	mitochondrion	Rpl34	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005730	nucleolus	RPL34	IDA		Human	GO_REF:0000052
Cellular Component	GO:0045202	synapse	Rpl34	EXP		Mouse	PMID:23071613
Cellular Component	GO:0045202	synapse	Rpl34	IDA		Mouse	PMID:23071613

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern