Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPL7
  • Mouse genes Rpl7
  • Rat genes LOC103694242,Rpl7
  • Zfish genes rpl7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpl7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008097	5S rRNA binding	Rpl7	IDA		Rat	PMID:3301408|RGD:11036099
Molecular Function	GO:0003677	DNA binding	RPL7	IDA		Human	PMID:8441630
Molecular Function	GO:0042802	identical protein binding	RPL7	IPI	UniProtKB:P18124	Human	PMID:8441630
Molecular Function	GO:0003729	mRNA binding	RPL7	IDA		Human	PMID:8441630
Molecular Function	GO:0005515	protein binding	RPL7	IPI	UniProtKB:Q15843	Human	PMID:18274552
Molecular Function	GO:0005515	protein binding	RPL7	IPI	UniProtKB:O00410	Human	PMID:20828572
Molecular Function	GO:0005515	protein binding	RPL7	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RPL7	IPI	UniProtKB:Q77YB1	Human	PMID:25854864
Molecular Function	GO:0003723	RNA binding	RPL7	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPL7	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPL7	IMP		Human	PMID:18697920
Molecular Function	GO:0003735	structural constituent of ribosome	RPL7	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPL7	IDA		Human	PMID:32669547
Molecular Function	GO:0003735	structural constituent of ribosome	Rpl7	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0031672	A band	Rpl7	IDA		Rat	PMID:2188648|RGD:11036104
Cellular Component	GO:0005737	cytoplasm	RPL7	HDA		Human	PMID:16791210
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL7	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL7	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPL7	IDA		Human	PMID:32669547
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl7	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl7	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl7	IDA		Mouse	PMID:2648130
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rpl7	IDA		Rat	PMID:863909|RGD:11036088
Cellular Component	GO:0022626	cytosolic ribosome	RPL7	IDA		Human	PMID:23636399
Cellular Component	GO:0005925	focal adhesion	RPL7	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	RPL7	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	RPL7	HDA		Human	PMID:16791210
Cellular Component	GO:0005634	nucleus	RPL7	HDA		Human	PMID:21630459
Cellular Component	GO:0005844	polysome	Rpl7	IDA		Mouse	PMID:22022532
Cellular Component	GO:0014069	postsynaptic density	RPL7	EXP		Human	PMID:21170055
Cellular Component	GO:0014069	postsynaptic density	RPL7	IDA		Human	PMID:21170055
Cellular Component	GO:1990904	ribonucleoprotein complex	RPL7	IDA		Human	PMID:18809582
Cellular Component	GO:0005840	ribosome	Rpl7	IDA		Rat	PMID:3730400|RGD:11036081
Cellular Component	GO:0045202	synapse	Rpl7	EXP		Mouse	PMID:16452087
Cellular Component	GO:0045202	synapse	Rpl7	IDA		Mouse	PMID:16452087
Biological Process	GO:0097421	liver regeneration	Rpl7	IEP		Rat	PMID:6121318|RGD:11038709
Biological Process	GO:0051726	regulation of cell cycle	rpl7	IMP	ZFIN:ZDB-GENO-040622-4	Zfish	PMID:15138505
Biological Process	GO:0042273	ribosomal large subunit biogenesis	RPL7	IMP		Human	PMID:18697920
Biological Process	GO:0006364	rRNA processing	RPL7	IMP		Human	PMID:18697920

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern