Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPLP1
  • Mouse genes Rplp1
  • Rat genes LOC100360522,RGD1564744,Rplp1
  • Zfish genes rplp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rplp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPLP1	IPI	UniProtKB:Q53EL6	Human	PMID:12054647
Molecular Function	GO:0005515	protein binding	RPLP1	IPI	UniProtKB:P05387	Human	PMID:22135285
Molecular Function	GO:0005515	protein binding	RPLP1	IPI	UniProtKB:P51687	Human	PMID:32296183
Molecular Function	GO:0043021	ribonucleoprotein complex binding	Rplp1	IPI	RGD:71058	Rat	PMID:16518874|RGD:10054427
Molecular Function	GO:0003735	structural constituent of ribosome	RPLP1	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPLP1	IDA		Human	PMID:3323886
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPLP1	IPI		Human	PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPLP1	HDA		Human	PMID:12962325
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	RPLP1	IDA		Human	PMID:3323886
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rplp1	IPI		Mouse	MGI:MGI:6810796|PMID:25901680
Cellular Component	GO:0022625	cytosolic large ribosomal subunit	Rplp1	IDA		Rat	PMID:7096359|RGD:11039475
Cellular Component	GO:0022626	cytosolic ribosome	RPLP1	IDA		Human	PMID:23636399
Cellular Component	GO:0005925	focal adhesion	RPLP1	HDA		Human	PMID:21423176
Cellular Component	GO:0045202	synapse	Rplp1	IDA		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rplp1	EXP		Mouse	PMID:25211037
Biological Process	GO:0071320	cellular response to cAMP	Rplp1	IEP		Rat	PMID:1850354|RGD:11039466
Biological Process	GO:1904401	cellular response to Thyroid stimulating hormone	Rplp1	IEP		Rat	PMID:1850354|RGD:11039466
Biological Process	GO:0030218	erythrocyte differentiation	rplp1	IMP	ZFIN:ZDB-MRPHLNO-070126-7,ZFIN:ZDB-MRPHLNO-070327-15	Zfish	PMID:24417973
Biological Process	GO:0045727	positive regulation of translation	Rplp1	IDA		Rat	PMID:9242705|RGD:11039477
Biological Process	GO:0006417	regulation of translation	Rplp1	IMP		Mouse	PMID:24959908

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern