Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPN1
  • Mouse genes Rpn1
  • Rat genes Rpn1
  • Zfish genes rpn1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q8TCJ2	Human	PMID:19167329
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q14165	Human	PMID:22988243
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:O43765	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q9UMX0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q9UMX0-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q14165	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q8TCJ2	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:O43765	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q9UMX0	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q14165	Human	PMID:31831667
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:O43765	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:P49069	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q8IUG1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPN1	IPI	UniProtKB:Q9H5K3	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	Rpn1	IPI	UniProtKB:Q9D328	Mouse	MGI:MGI:6694364|PMID:32783947
Molecular Function	GO:0003723	RNA binding	RPN1	HDA		Human	PMID:22658674
Cellular Component	GO:0005829	cytosol	RPN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	RPN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Rpn1	IDA		Mouse	PMID:9930704
Cellular Component	GO:0016020	membrane	RPN1	HDA		Human	PMID:19946888
Cellular Component	GO:0008250	oligosaccharyltransferase complex	RPN1	IPI		Human	PMID:31831667
Cellular Component	GO:0008250	oligosaccharyltransferase complex	RPN1	IDA		Human	PMID:9642163
Cellular Component	GO:0008250	oligosaccharyltransferase complex	Rpn1	IDA		Mouse	PMID:27974209
Cellular Component	GO:0005791	rough endoplasmic reticulum	Rpn1	IDA		Mouse	PMID:25009997
Cellular Component	GO:0005791	rough endoplasmic reticulum	Rpn1	IDA		Rat	PMID:15623521|RGD:1625439
Biological Process	GO:0006487	protein N-linked glycosylation	RPN1	IDA		Human	PMID:31831667
Biological Process	GO:0006487	protein N-linked glycosylation	RPN1	IDA		Human	PMID:9642163
Biological Process	GO:0018279	protein N-linked glycosylation via asparagine	RPN1	IMP		Human	PMID:17264154

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern