Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPN2
  • Mouse genes Rpn2
  • Rat genes Rpn2
  • Zfish genes rpn2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpn2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPN2	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RPN2	IPI	UniProtKB:Q96C12	Human	PMID:28169274
Molecular Function	GO:0005515	protein binding	RPN2	IPI	UniProtKB:Q5TDH0	Human	PMID:29290612
Molecular Function	GO:0005515	protein binding	RPN2	IPI	UniProtKB:Q9H5K3	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	Rpn2	IPI	UniProtKB:Q9D328	Mouse	MGI:MGI:6694364|PMID:32783947
Molecular Function	GO:0043022	ribosome binding	Rpn2	IDA		Rat	PMID:418074|RGD:2325971
Cellular Component	GO:0000421	autophagosome membrane	Rpn2	IDA		Rat	PMID:2351689|RGD:2325969
Cellular Component	GO:0005783	endoplasmic reticulum	RPN2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	RPN2	HDA		Human	PMID:19946888
Cellular Component	GO:0016604	nuclear body	RPN2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0008250	oligosaccharyltransferase complex	RPN2	IPI		Human	PMID:31831667
Cellular Component	GO:0008250	oligosaccharyltransferase complex	RPN2	IDA		Human	PMID:9642163
Cellular Component	GO:0005791	rough endoplasmic reticulum	Rpn2	IDA		Rat	PMID:15623521|RGD:1625439
Cellular Component	GO:0005791	rough endoplasmic reticulum	Rpn2	IDA		Rat	PMID:7673362|RGD:2325967
Biological Process	GO:0007568	aging	Rpn2	IEP		Rat	PMID:12746483|RGD:2325966
Biological Process	GO:0006487	protein N-linked glycosylation	RPN2	IDA		Human	PMID:31831667
Biological Process	GO:0006487	protein N-linked glycosylation	RPN2	IDA		Human	PMID:9642163
Biological Process	GO:0006487	protein N-linked glycosylation	Rpn2	IMP		Mouse	PMID:18724378
Biological Process	GO:0009410	response to xenobiotic stimulus	Rpn2	IEP		Rat	PMID:17968466|RGD:2325964

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern