Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPRD1B
  • Mouse genes Rprd1b
  • Rat genes Rprd1b
  • Zfish genes rprd1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rprd1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	RPRD1B	IPI	UniProtKB:Q9NQG5	Human	PMID:24997600
Molecular Function	GO:0042802	identical protein binding	RPRD1B	IPI	UniProtKB:Q9NQG5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:P24928	Human	PMID:22264791
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:P24928	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q8IXW5	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q96P16	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:P24928	Human	PMID:24997600
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q8IXW5	Human	PMID:24997600
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q96P16	Human	PMID:24997600
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q96P16-1	Human	PMID:24997600
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:P24928	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q96P16	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:A5D8V6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:O14787-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:O15212	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:P09017	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:P20618	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:P61970	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:P78356-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q53HL2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q5SQQ9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q7KZS0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q86WH2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q96D03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q96P16-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q9H5V9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q9NP66	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q9NQY0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPRD1B	IPI	UniProtKB:Q9NZD8	Human	PMID:32296183
Molecular Function	GO:0000993	RNA polymerase II complex binding	RPRD1B	IDA		Human	PMID:22264791
Cellular Component	GO:0005654	nucleoplasm	RPRD1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RPRD1B	IDA		Human	PMID:22231121
Cellular Component	GO:0005634	nucleus	RPRD1B	IDA		Human	PMID:22264791
Cellular Component	GO:0097550	transcription preinitiation complex	RPRD1B	IDA		Human	PMID:22231121
Biological Process	GO:0008284	positive regulation of cell population proliferation	RPRD1B	IDA		Human	PMID:22264791
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	RPRD1B	IDA		Human	PMID:22264791
Biological Process	GO:0010564	regulation of cell cycle process	RPRD1B	IDA		Human	PMID:22264791
Biological Process	GO:0001111	RNA polymerase II promoter clearance	RPRD1B	IMP		Human	PMID:22231121

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern