Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPS11
  • Mouse genes Rps11
  • Rat genes Rps11
  • Zfish genes rps11,rps11b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rps11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPS11	IPI	UniProtKB:Q99558	Human	PMID:14743216
Molecular Function	GO:0005515	protein binding	RPS11	IPI	UniProtKB:Q5S007	Human	PMID:24725412
Molecular Function	GO:0005515	protein binding	RPS11	IPI	UniProtKB:Q5S007	Human	PMID:31046837
Molecular Function	GO:0005515	protein binding	RPS11	IPI	UniProtKB:Q99558	Human	PMID:31980649
Molecular Function	GO:0003723	RNA binding	RPS11	HDA		Human	PMID:22658674
Molecular Function	GO:0003735	structural constituent of ribosome	RPS11	HDA		Human	PMID:15883184
Molecular Function	GO:0003735	structural constituent of ribosome	RPS11	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	Rps11	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0005737	cytoplasm	RPS11	HDA		Human	PMID:16791210
Cellular Component	GO:0022626	cytosolic ribosome	RPS11	IDA		Human	PMID:23636399
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS11	HDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS11	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps11	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps11	IDA		Rat	PMID:3838984|RGD:633996
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps11	IDA		Rat	PMID:925037|RGD:2300014
Cellular Component	GO:0070062	extracellular exosome	RPS11	HDA		Human	PMID:19056867
Cellular Component	GO:0005925	focal adhesion	RPS11	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	RPS11	HDA		Human	PMID:19946888
Cellular Component	GO:0016020	membrane	Rps11	HDA		Rat	PMID:16210410|RGD:8655526
Cellular Component	GO:0005730	nucleolus	RPS11	HDA		Human	PMID:16791210
Cellular Component	GO:0045202	synapse	Rps11	IDA		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rps11	EXP		Mouse	PMID:25211037
Biological Process	GO:0001649	osteoblast differentiation	Rps11	HDA		Rat	PMID:16210410|RGD:8655526

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern