Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPS16
  • Mouse genes Rps16
  • Rat genes Rps16
  • Zfish genes rps16
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rps16

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPS16	IPI	UniProtKB:Q5S007	Human	PMID:24725412
Molecular Function	GO:0005515	protein binding	RPS16	IPI	UniProtKB:Q5S007	Human	PMID:31046837
Molecular Function	GO:0003723	RNA binding	RPS16	IDA		Human	PMID:17881366
Molecular Function	GO:0003723	RNA binding	RPS16	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPS16	HDA		Human	PMID:15883184
Molecular Function	GO:0003735	structural constituent of ribosome	RPS16	IMP		Human	PMID:18697920
Molecular Function	GO:0003735	structural constituent of ribosome	RPS16	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	Rps16	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022626	cytosolic ribosome	RPS16	IDA		Human	PMID:23636399
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS16	HDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS16	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps16	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps16	IDA		Rat	PMID:2328735|RGD:1599573
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps16	IDA		Rat	PMID:925037|RGD:2300014
Cellular Component	GO:0070062	extracellular exosome	RPS16	HDA		Human	PMID:20458337
Cellular Component	GO:0005925	focal adhesion	RPS16	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	RPS16	HDA		Human	PMID:19946888
Cellular Component	GO:0015935	small ribosomal subunit	RPS16	HDA		Human	PMID:15883184
Cellular Component	GO:0045202	synapse	Rps16	EXP		Mouse	PMID:25211037
Cellular Component	GO:0045202	synapse	Rps16	IDA		Mouse	PMID:25211037
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Rps16	IEP		Mouse	PMID:20439489
Biological Process	GO:0097421	liver regeneration	Rps16	IEP		Rat	PMID:6121318|RGD:11038709
Biological Process	GO:0042274	ribosomal small subunit biogenesis	RPS16	IMP		Human	PMID:18697920
Biological Process	GO:0006364	rRNA processing	RPS16	IMP		Human	PMID:18697920

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern