Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPS25
  • Mouse genes Rps25
  • Rat genes Rps25
  • Zfish genes rps25
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rps25

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPS25	IPI	UniProtKB:Q8IWS0	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	RPS25	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RPS25	IPI	UniProtKB:Q9NVV9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPS25	IPI	UniProtKB:O43829	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPS25	IPI	UniProtKB:Q6NT76	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPS25	IPI	UniProtKB:Q6ZUT1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPS25	IPI	UniProtKB:Q96MF2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RPS25	IPI	UniProtKB:Q9H2G4	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	RPS25	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPS25	HDA		Human	PMID:15883184
Molecular Function	GO:0003735	structural constituent of ribosome	RPS25	IMP		Human	PMID:18697920
Molecular Function	GO:0003735	structural constituent of ribosome	RPS25	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	Rps25	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Molecular Function	GO:0003735	structural constituent of ribosome	Rps25	IMP		Rat	PMID:3378620|RGD:2299075
Cellular Component	GO:0022626	cytosolic ribosome	RPS25	IDA		Human	PMID:23636399
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS25	HDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS25	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps25	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps25	IDA		Rat	PMID:3378620|RGD:2299075
Cellular Component	GO:0070062	extracellular exosome	RPS25	HDA		Human	PMID:20458337
Cellular Component	GO:0005730	nucleolus	RPS25	IDA		Human	PMID:10050887
Cellular Component	GO:0005634	nucleus	RPS25	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	RPS25	IDA		Human	PMID:22720776
Cellular Component	GO:0005634	nucleus	Rps25	IDA		Rat	PMID:8144559|RGD:1304507
Cellular Component	GO:0005844	polysome	Rps25	IDA		Rat	PMID:8144559|RGD:1304507
Cellular Component	GO:0014069	postsynaptic density	RPS25	EXP		Human	PMID:21170055
Cellular Component	GO:0014069	postsynaptic density	RPS25	IDA		Human	PMID:21170055
Cellular Component	GO:0005840	ribosome	RPS25	IDA		Human	PMID:1748303
Cellular Component	GO:0015935	small ribosomal subunit	RPS25	HDA		Human	PMID:15883184
Cellular Component	GO:0045202	synapse	Rps25	IDA		Mouse	PMID:16452087
Cellular Component	GO:0045202	synapse	Rps25	EXP		Mouse	PMID:16452087
Biological Process	GO:0034198	cellular response to amino acid starvation	Rps25	IEP		Rat	PMID:8144559|RGD:1304507
Biological Process	GO:0000028	ribosomal small subunit assembly	Rps25	IMP		Rat	PMID:3378620|RGD:2299075
Biological Process	GO:0042274	ribosomal small subunit biogenesis	RPS25	IMP		Human	PMID:18697920
Biological Process	GO:0006364	rRNA processing	RPS25	IMP		Human	PMID:18697920

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern