Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPS6KC1
  • Mouse genes Rps6kc1
  • Rat genes Rps6kc1
  • Zfish genes rps6kc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rps6kc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPS6KC1	IPI	UniProtKB:P30048	Human	PMID:15750338
Molecular Function	GO:0005515	protein binding	RPS6KC1	IPI	UniProtKB:P11473-2	Human	PMID:32296183
Cellular Component	GO:0005769	early endosome	RPS6KC1	IDA		Human	PMID:15750338
Cellular Component	GO:0005768	endosome	RPS6KC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005764	lysosome	RPS6KC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0014069	postsynaptic density	Rps6kc1	EXP		Mouse	PMID:25211037
Cellular Component	GO:0014069	postsynaptic density	Rps6kc1	IDA		Mouse	PMID:25211037

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern