Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPS7
  • Mouse genes Rps7
  • Rat genes Rps7,Rps7-ps23
  • Zfish genes rps7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rps7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003730	mRNA 3'-UTR binding	RPS7	IDA		Human	PMID:16213212
Molecular Function	GO:0048027	mRNA 5'-UTR binding	RPS7	IDA		Human	PMID:16213212
Molecular Function	GO:0008266	poly(U) RNA binding	Rps7	IDA		Rat	PMID:511842|RGD:11040684
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:Q96P70	Human	PMID:11823430
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:Q00987	Human	PMID:17310983
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:Q15843	Human	PMID:18274552
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:Q00987	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:O43829	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:Q9BSY9	Human	PMID:28483520
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:O43829	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:O42480	Human	PMID:9687515
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:P52297	Human	PMID:9687515
Molecular Function	GO:0005515	protein binding	RPS7	IPI	UniProtKB:Q28CS8	Human	PMID:9687515
Molecular Function	GO:0019901	protein kinase binding	RPS7	IPI	UniProtKB:Q9HC98	Human	PMID:20873783
Molecular Function	GO:0003723	RNA binding	RPS7	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPS7	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPS7	HDA		Human	PMID:15883184
Molecular Function	GO:0003735	structural constituent of ribosome	RPS7	IMP		Human	PMID:18697920
Molecular Function	GO:0003735	structural constituent of ribosome	RPS7	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	Rps7	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Molecular Function	GO:1990948	ubiquitin ligase inhibitor activity	RPS7	IDA		Human	PMID:17310983
Cellular Component	GO:0005813	centrosome	RPS7	IDA		Human	PMID:20873783
Cellular Component	GO:0022626	cytosolic ribosome	RPS7	IDA		Human	PMID:23636399
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS7	HDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS7	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps7	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps7	IDA		Rat	PMID:2328735|RGD:1599573
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps7	IDA		Rat	PMID:6196023|RGD:2299087
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps7	IDA		Rat	PMID:947902|RGD:2300010
Cellular Component	GO:0005925	focal adhesion	RPS7	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	RPS7	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	RPS7	IDA		Human	PMID:11823430
Cellular Component	GO:0005634	nucleus	RPS7	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	RPS7	IDA		Human	PMID:9687515
Cellular Component	GO:0032991	protein-containing complex	RPS7	IMP		Human	PMID:17310983
Cellular Component	GO:0032991	protein-containing complex	RPS7	IDA		Human	PMID:20873783
Cellular Component	GO:1990904	ribonucleoprotein complex	RPS7	IDA		Human	PMID:18809582
Cellular Component	GO:0005840	ribosome	RPS7	HDA		Human	PMID:15883184
Cellular Component	GO:0045202	synapse	Rps7	EXP		Mouse	PMID:16452087
Cellular Component	GO:0045202	synapse	Rps7	IDA		Mouse	PMID:16452087
Biological Process	GO:0043009	chordate embryonic development	rps7	IMP	ZFIN:ZDB-MRPHLNO-110804-4	Zfish	PMID:21550419
Biological Process	GO:0030097	hemopoiesis	rps7	IMP	ZFIN:ZDB-MRPHLNO-110804-4	Zfish	PMID:21550419
Biological Process	GO:1904667	negative regulation of ubiquitin protein ligase activity	RPS7	IDA		Human	PMID:17310983
Biological Process	GO:2000059	negative regulation of ubiquitin-dependent protein catabolic process	RPS7	IDA		Human	PMID:17310983
Biological Process	GO:0014033	neural crest cell differentiation	Rps7	IMP	MGI:MGI:3043039	Mouse	PMID:15384171
Biological Process	GO:0001843	neural tube closure	Rps7	IMP	MGI:MGI:3043039	Mouse	PMID:15384171
Biological Process	GO:0010628	positive regulation of gene expression	RPS7	IMP		Human	PMID:17310983
Biological Process	GO:1902255	positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator	RPS7	IMP		Human	PMID:17310983
Biological Process	GO:0050821	protein stabilization	RPS7	IMP		Human	PMID:17310983
Biological Process	GO:0051726	regulation of cell cycle	rps7	IMP	ZFIN:ZDB-GENO-040622-5	Zfish	PMID:15138505
Biological Process	GO:0042274	ribosomal small subunit biogenesis	RPS7	IMP		Human	PMID:18697920
Biological Process	GO:0006364	rRNA processing	RPS7	IMP		Human	PMID:18697920

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern