Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RRP7A,RRP7BP
  • Mouse genes Rrp7a
  • Rat genes Rrp7a
  • Zfish genes rrp7a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rrp7a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RRP7A	IPI	UniProtKB:Q9UBB9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RRP7A	IPI	UniProtKB:Q9UBB9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RRP7A	IPI	UniProtKB:O95257	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RRP7A	IPI	UniProtKB:Q96GN5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RRP7A	IPI	UniProtKB:Q9H6L4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RRP7A	IPI	UniProtKB:Q9H6R4	Human	PMID:33199730
Molecular Function	GO:0003723	RNA binding	RRP7A	HDA		Human	PMID:22658674
Cellular Component	GO:0005813	centrosome	RRP7A	IDA		Human	PMID:33199730
Cellular Component	GO:0005929	cilium	RRP7A	IDA		Human	PMID:33199730
Cellular Component	GO:0005737	cytoplasm	Rrp7a	IDA		Mouse	PMID:23211737
Cellular Component	GO:0005730	nucleolus	RRP7A	IDA		Human	PMID:33199730
Biological Process	GO:0001825	blastocyst formation	Rrp7a	IMP		Mouse	PMID:27869233
Biological Process	GO:0001825	blastocyst formation	Rrp7a	IMP		Mouse	PMID:23211737
Biological Process	GO:0061523	cilium disassembly	RRP7A	IMP		Human	PMID:33199730
Biological Process	GO:0060322	head development	rrp7a	IMP	ZFIN:ZDB-MRPHLNO-210713-2	Zfish	PMID:33199730
Biological Process	GO:0060322	head development	rrp7a	IMP	ZFIN:ZDB-MRPHLNO-210713-1	Zfish	PMID:33199730
Biological Process	GO:0060322	head development	rrp7a	IMP	ZFIN:ZDB-GENO-220314-1	Zfish	PMID:33199730
Biological Process	GO:1902570	protein localization to nucleolus	RRP7A	IMP		Human	PMID:33199730
Biological Process	GO:2000232	regulation of rRNA processing	rrp7a	IMP	ZFIN:ZDB-GENO-220314-1	Zfish	PMID:33199730
Biological Process	GO:0042254	ribosome biogenesis	RRP7A	IMP		Human	PMID:33199730
Biological Process	GO:0006364	rRNA processing	RRP7A	IMP		Human	PMID:33199730

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern