Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RRS1
  • Mouse genes Rrs1
  • Rat genes Rrs1
  • Zfish genes rrs1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rrs1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008097	5S rRNA binding	RRS1	IDA		Human	PMID:24120868
Molecular Function	GO:0005515	protein binding	RRS1	IPI	UniProtKB:Q92624	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RRS1	IPI	UniProtKB:Q92624	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RRS1	IPI	UniProtKB:Q9H7B2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RRS1	IPI	UniProtKB:Q9H7B2	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	RRS1	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RRS1	IPI	UniProtKB:Q92624	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rrs1	IPI	UniProtKB:Q80WJ7|UniProtKB:Q86UE4	Mouse	MGI:MGI:4352957|PMID:19433866
Molecular Function	GO:0003723	RNA binding	RRS1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RRS1	HDA		Human	PMID:22681889
Cellular Component	GO:0000794	condensed nuclear chromosome	RRS1	IDA		Human	PMID:19465021
Cellular Component	GO:0005783	endoplasmic reticulum	Rrs1	IDA		Mouse	MGI:MGI:4352957|PMID:19433866
Cellular Component	GO:0005730	nucleolus	RRS1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	RRS1	IDA		Human	PMID:19465021
Cellular Component	GO:0005730	nucleolus	Rrs1	IDA		Mouse	MGI:MGI:4352957|PMID:19433866
Cellular Component	GO:0005654	nucleoplasm	RRS1	IDA		Human	GO_REF:0000052
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	Rrs1	IMP		Mouse	PMID:24029230
Biological Process	GO:0007080	mitotic metaphase plate congression	RRS1	IMP		Human	PMID:19465021
Biological Process	GO:1902570	protein localization to nucleolus	RRS1	IMP		Human	PMID:24120868
Biological Process	GO:1901796	regulation of signal transduction by p53 class mediator	RRS1	IMP		Human	PMID:24120868
Biological Process	GO:0000027	ribosomal large subunit assembly	RRS1	IMP		Human	PMID:24120868
Biological Process	GO:0042273	ribosomal large subunit biogenesis	RRS1	IMP		Human	PMID:24120868

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern